| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1512 |
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| Symbol | |
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| ID | 5613345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1798971 |
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| End bp | 1800728 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932378 |
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| Product | peptide synthase |
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| Protein accession | YP_001473251 |
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| Protein GI | 157374651 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGCCT CTTTAACTGC CAGCCACTCT TCAAAGGTGA ATAACAGTGA ACCCGGCGCT
AATCTCTGCC GCCATCTCAA TCACGCCGCT TCAGATATCC CCACAGAACT TGCCGTTGCG
GTACAACACG CATCCGGTTC AATATTTTCT GCTACATCTC TAAATTATAA AGAGCTCACC
TTTGCCGAGC TCGATAGTCT CAGTGATAAG CTTGCCCATG CTTTAAATGC ATATGGGATC
AAACGTGGCA TGAAAGCCGT GTTGATGGTG ACACCTAGCC TGGACTTTTT CACTCTGACC
TTCGCACTCT TTAAAGCCGG GATTATTCCA ATTCTTGTGG ATCCGGGAAT GGGAGTTAAG
AATCTCAAGC AGTGCTTTAT CGAATCTCAG CCCGATGCAT TTATCGCCAT CCCTAAGGCG
CACCTGGCCA GAAGATTATT TTCCTGGGGT AAAGACTCGG TTAAGCATCT TGTGACTGTA
GGCGGCTGTG GATTATGGGG TGGGGTGAGT CTGGATACCT TGATGGAAGG TGTCACATCA
GCCTCATCTG GAAGCGCCTA TGAGATGGTT TGGCTCGATG AAGATGAGAT GGCCGCAATC
TTGTTTACCA GCGGCAGTAC CGGCACGCCA AAGGGCGTGG TTTATTCTCA TAAGATGTTT
GAAGCGCAGA TAACTGCGTT AAAGAATGAT TACGGTATCG CCCCCGGTGA ACGGGACTTA
GCGACCTTCC CACTGTTTTC TCTGTTTGGC CCGGCGCTTG GTATGGCCTC AATTGTGCCG
GAAATGGATG CCAGTAAGCC TATTACCGCT AATCCGGATT ATCTGTTTGC CGCGATAGGG
AAATATCAAT GCTCTAATAT GTTCGTCAAT CCGGCCTTGA TTGAACGATT AGGCCAAGCG
GGTGTAACAC AAACGCAGAT ACATAAATTA TCGAGTATCA AACGGGTTAT CTCTGCCGGC
GCGCCGGCGA CCATTGCCTC GATTAAGCAT TTTAGTCAGA TGTTAAATGA TGGCGTCGAG
GTGCTTAACT CCTATGGGGC AACCGAATCT CTGCCTCTGA GTAAGATGGG GAGTCAGGCG
CTGTTTGCCA CAACTGAGGT TACCGACTCA GGTGGCGGCA TCTGTGTGGG AAGCCCCATA
GAGGGGGTAG ATATCGCGAT TATCGATATC AGCGAGGCGC CGATTACACA ATGGAATGAG
AATTTAAGGT TAAAGCCGGG CGAAATTGGT GAGATAGTGG TAAAAGGCCC TATGGTCAGT
CGCAGCTACT ACAGACGAGA CAGCGCCACC GAGCAGGCCA AGATAATCGA TGGCAGCGCC
ATTCGCCATC GTATGGGCGA TTTAGGTTAT CTCGATGATG AAGGTTATTT ATGGATGTGT
GGCCGTAAGG CCCACAGAGT CGATACAAGT CAGAGTGTGA AGGGAGAGCC TGCCCGATAT
TTCTCTATTC CCTGTGAGCG GATTTTTAAT ACTCATCCGC AGGTGAAACG TTCGGCGTTA
GTGGGGATCG AAGTTAAAGA TCAATCGGGC GTTCCGGAAG TCGTGCCTCT ACTCTGTTTA
GAGCTAAACA AGTCACTGTC ATGCTCTCTC GGTGCAGGGC TTTATGCAGA GCTGAATGCT
ATTGCCGAAA AGCATACACA GACACACGGC ATTAAGCGTT TCCTTATCCA CCCTGAATTT
CCTGTCGATA TTCGCCATAA TGCAAAAATT TTCCGTGAAA AATTGGCCGT TTGGGCTCAG
AAAAATCATA AGGAATAG
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| Protein sequence | MSASLTASHS SKVNNSEPGA NLCRHLNHAA SDIPTELAVA VQHASGSIFS ATSLNYKELT
FAELDSLSDK LAHALNAYGI KRGMKAVLMV TPSLDFFTLT FALFKAGIIP ILVDPGMGVK
NLKQCFIESQ PDAFIAIPKA HLARRLFSWG KDSVKHLVTV GGCGLWGGVS LDTLMEGVTS
ASSGSAYEMV WLDEDEMAAI LFTSGSTGTP KGVVYSHKMF EAQITALKND YGIAPGERDL
ATFPLFSLFG PALGMASIVP EMDASKPITA NPDYLFAAIG KYQCSNMFVN PALIERLGQA
GVTQTQIHKL SSIKRVISAG APATIASIKH FSQMLNDGVE VLNSYGATES LPLSKMGSQA
LFATTEVTDS GGGICVGSPI EGVDIAIIDI SEAPITQWNE NLRLKPGEIG EIVVKGPMVS
RSYYRRDSAT EQAKIIDGSA IRHRMGDLGY LDDEGYLWMC GRKAHRVDTS QSVKGEPARY
FSIPCERIFN THPQVKRSAL VGIEVKDQSG VPEVVPLLCL ELNKSLSCSL GAGLYAELNA
IAEKHTQTHG IKRFLIHPEF PVDIRHNAKI FREKLAVWAQ KNHKE
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