| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1510 |
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| Symbol | |
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| ID | 5613535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1796774 |
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| End bp | 1797823 |
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| Gene Length | 1050 bp |
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| Protein Length | 349 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640932376 |
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| Product | 3-oxoacyl-(acyl carrier protein) synthase III |
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| Protein accession | YP_001473249 |
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| Protein GI | 157374649 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATT CCCGAGTATT TATCAATAGC CTGGCATATG AACTGGCACC CGAAGTGGTG
TCCACTTCCG AATTAGAATC TCGATTGGCA CCGCTATATA AGAAATATCG CATTCCTATG
GGGCAGCTTG CCGCATTAAC GGGGATCCAA GAGCGTCGCT GGTGGCCCAA AGGCCACAGA
CTGTCCGACG GAGCCTTGGC TGCGGCGCAT AAAGCCATCA ATGAAACTGG CGTTCAAGTT
GGTGATTTAG GTGCAGTCGT CTATACCGGT GTGTGCCGCG ACCAGCATGA GCCTGCAACG
GCGTGTCGCA TAGCCGCCGA ACTTGGCGTG TCAAAAGATA CGGCAATCTA TGATATCAGT
AACGCCTGTT TAGGTGTCTT GTCCGGTATC TTAGATATTG CTAACCGCAT TGAGTTGGGG
CAGATTAAGG CCGGTTTAGT TGTCTCTTGT GAATCGGCAC GTCATATTGT CGATATCACC
ATAGATAATA TGCTGGCCGA TCCTACCATG CAGAATTATG CTCAGTCTTT GGCGACCCTT
ACCGGTGGTT CGGGTGCTGT TGCGGTGCTT CTGACCGATG GTAGCTTGCC TCTTCAAGGC
GAACGTCAAC ACCAACTATT AGGTGCCAGT CACCGTTCTG CTCCTGAACA CCACAATCTT
TGTCAGTGGG GCTTACAGGA GGCAGGTGTG CATCTTTATC GTGAATTTAT GCGTACCGAC
GGTGTCACCT TGCTGAAAGA GGGCGTTGAA CTGGCACGTG ACACTTGGAG CCATTTCTTA
GATCAACGAA ATTGGTTGGT TGAGCAGGTC GACAAAGTGA TCTGTCATCA GGTGGGGGCG
TCAAACCGAC GCCAAGTGCT TAATGCGCTC AATATTCCTC AAGAGAAAGA GTTTCCTACC
TACCAATTGC TGGGCAATAT GGGCACGGTA TCTCTGCCTG TTACAGCCGC GATGGCCCAC
GATCAAGGTT TCCTTCAGAA GGGCGATCAG GTAAGTTTCC TCGGTATTGG CAGTGGCTTA
AACTGTATGA TGCTTGGAAT TAAGTGGTAA
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| Protein sequence | MKYSRVFINS LAYELAPEVV STSELESRLA PLYKKYRIPM GQLAALTGIQ ERRWWPKGHR
LSDGALAAAH KAINETGVQV GDLGAVVYTG VCRDQHEPAT ACRIAAELGV SKDTAIYDIS
NACLGVLSGI LDIANRIELG QIKAGLVVSC ESARHIVDIT IDNMLADPTM QNYAQSLATL
TGGSGAVAVL LTDGSLPLQG ERQHQLLGAS HRSAPEHHNL CQWGLQEAGV HLYREFMRTD
GVTLLKEGVE LARDTWSHFL DQRNWLVEQV DKVICHQVGA SNRRQVLNAL NIPQEKEFPT
YQLLGNMGTV SLPVTAAMAH DQGFLQKGDQ VSFLGIGSGL NCMMLGIKW
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