| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1509 |
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| Symbol | |
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| ID | 5613534 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1795234 |
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| End bp | 1796514 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932375 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473248 |
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| Protein GI | 157374648 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 42 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTAACA ATCCGCTAAA GCCCCAGCAA AAGACCGCGC ACAAGACCCA ACAAAGCGCC
TTATTTAAAA GGCTTGATAC CTTGTTAGTT CAAAGTCGTG ACTTATGGCA AGTTAAGGCA
TTCGAGTGCA CGTCGCTTCC ATGGGGGACT CAGTTCCCGC GTTTAGCCGA GCGTGTCTGG
TCGATTGCTG ATGAAGATAT TGATGATGTC GACAGAGGGC AGTCTTCCCT TATTGCCGTA
CTATTGCCCT CCCTGACTGA AGATCTGATG GAGGCTGGAC TCGAGTGGGA GTTGAGTCTG
TTGGACATCA CATCGCCATT GTGCGGTGAG CCAGACAAAG CGTTATTGTC CCATAGAGAG
CTGCCCGATA GTGAGCTATC TCATTTCAGC GCGGGTATTA AGGGACGTAA GTGGGAACAG
ATTAATGCTT TCGCAGGGCA ATTAACTCGG TGTGATAGTG ACGTGTTGGA ATGGTGTGCC
GGTAAGGGGC ATTTAGGGCG TTTGATTGCA AAGGCCCATA ATCGTTCTGT CGTCAGTCTC
GAGTGGCAAC AAAGCTTGTG TGAAGCCGGT ACTGACTTTG CCGAGCAGTG GCATCTACCA
CAAACCTTCA TTTGCGCCGA TGCGTTTGCA GCCAAGCAAA GCCAGTTAAA AGTTAATCAA
CAGGCCGTTG CACTGCATGC TTGTGGTGAT CTTCATGTCG AGCTGATTCG GTTAGCCTCA
GTGGCCGGGA CCAGGAATAT TGCATTTTCA CCTTGTTGTT ATCACCTTAT TCGTGCCAAA
GAGTACGAAG CTCTTAGCAG AGGTGCGCGT AACAGCGCGC TGAGCCTGAG CCGACATGAT
CTGCAATTAC CACTGCAACA AAGTACGATT GCCGGCAGTA AGCAACAGGA GCTGAGGCAT
CGGGAGATCG CCTGGCGCCT TGGATTTGAT TCATTGCAGC GCGAGGTTCG AGGTTGCGAG
AAATACCTGC CAATTCCTTC GATAAAGCAG AGTCAGCTCA GTGGTGACTT TAATGCTTTT
TGTCTCTGGG CCGCACAAAC AAAATCAGTT CCTTTACCAG AGAATATAAA TTTTGAGTAT
TTTGAACAAT CAGGTTTGAA ACGTCAGCGA TTGACCAGAA GAGTCGATCT GGTTGCTCAC
CTTTTTCGAG CCGTGCTGGA ACATTGGTTG TTACTGGATA GAGTTTGTTT TCTTGAAGAG
CAAGGCTATA GTGTCTCCCT CAGGAAATTT TGTTCAGAGC GGGTTACACC GCGTAATTCA
TTAATTCAGG CCGAAAAATA A
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| Protein sequence | MPNNPLKPQQ KTAHKTQQSA LFKRLDTLLV QSRDLWQVKA FECTSLPWGT QFPRLAERVW
SIADEDIDDV DRGQSSLIAV LLPSLTEDLM EAGLEWELSL LDITSPLCGE PDKALLSHRE
LPDSELSHFS AGIKGRKWEQ INAFAGQLTR CDSDVLEWCA GKGHLGRLIA KAHNRSVVSL
EWQQSLCEAG TDFAEQWHLP QTFICADAFA AKQSQLKVNQ QAVALHACGD LHVELIRLAS
VAGTRNIAFS PCCYHLIRAK EYEALSRGAR NSALSLSRHD LQLPLQQSTI AGSKQQELRH
REIAWRLGFD SLQREVRGCE KYLPIPSIKQ SQLSGDFNAF CLWAAQTKSV PLPENINFEY
FEQSGLKRQR LTRRVDLVAH LFRAVLEHWL LLDRVCFLEE QGYSVSLRKF CSERVTPRNS
LIQAEK
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