| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1504 |
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| Symbol | |
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| ID | 5610713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1789369 |
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| End bp | 1790079 |
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| Gene Length | 711 bp |
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| Protein Length | 236 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932370 |
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| Product | transcriptional regulator PhoU |
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| Protein accession | YP_001473243 |
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| Protein GI | 157374643 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0704] Phosphate uptake regulator |
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| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.682781 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 44 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAAATA TGAATTTAAG TAAGCACATC TCTGGTCAGT TTAATGCCGA GCTGGATGAT
ATCCGTAATC GTGTCTTAGC TATGGGCGGT TTAGTCGAAC GTCAACTGGA ACAGTCTCTG
GATGCCCTAA GTACATTGGA CTCTGAGTTG GCGCAGAAAG TTATCGATGG CGATCATAAG
GTCAATGGTA TGGAAGTGGC CATAGATGAA GAGTGTACCC GTATCATTGC CAAGCGTCAG
CCTGCTGCGA GCGATTTACG TTTAGTACTT GCGATATCGA AAACGATTAC CGATCTGGAG
CGCATCGGTG ATGCTTGCGT GAAGATAGCT AAGGCTGCAA TGGATAAACG CTCTAAAAAC
CAGCAGCCAC TACTGGTAAG CATCGAGAAC ATGGGACGTC ACGCGACGCG TATGCTCAAT
GCCACTTTAG ATGCTCTGGC GCGTATGGAC GCCGAAGTGG CACTCGAGCT GCATAAAGAA
GACATTAAGT TAGATAAAGA GTATGAAGGG ATCATTCGCC AATTAATGAC CTATATGATG
GCCGATCCAC GTTCAATTCC CGAAGTGTTA GATGTGCTTT GGGCTGCAAG GGCTGTTGAG
CGAGTGGGTG ACCGTTGCCA GAATATCTGT GAGTACATCA TCTATTACGT GAAAGGGAAA
GATGTGCGCC ATGTCTCCTA TGAAGAGATG GAGAAAGACC TTAATTTTTA A
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| Protein sequence | MENMNLSKHI SGQFNAELDD IRNRVLAMGG LVERQLEQSL DALSTLDSEL AQKVIDGDHK
VNGMEVAIDE ECTRIIAKRQ PAASDLRLVL AISKTITDLE RIGDACVKIA KAAMDKRSKN
QQPLLVSIEN MGRHATRMLN ATLDALARMD AEVALELHKE DIKLDKEYEG IIRQLMTYMM
ADPRSIPEVL DVLWAARAVE RVGDRCQNIC EYIIYYVKGK DVRHVSYEEM EKDLNF
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