| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1497 |
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| Symbol | |
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| ID | 5610360 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1778291 |
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| End bp | 1779454 |
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| Gene Length | 1164 bp |
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| Protein Length | 387 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640932363 |
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| Product | NirV precursor |
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| Protein accession | YP_001473236 |
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| Protein GI | 157374636 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0186201 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAATA GAGTTATTCA GACGTTCATT TTCGCATTGT CACCATTTTT TCTACAAGCA
ACAGCCGGAG AGTTATCTAT TCCTGCTGCT CACGCTACCG ATAACCCTGT TTCTGTTTTG
AGCCAGAAGA TTAAAGGTGT ACAGCGACAA CAAACTATCT TAGCTGAAGA AATTATTGTC
TATAACAAGA AGCAGCGCAC ACTATTAAGT CAACAGGAAA AGGCGGCAAC GGCTGTCCTT
GACGCAGAAA AGAACAGAAA AAAAGCACAA AAGCAGCTAG ATAATCAATT TAAGGCACTA
CTTAATGATC CTTCAGCTGA CATTACTGCC ACCAAAAACA GATATCAACA AGCATGGCAA
TCACTGCAAG ATAGCCAGAA GGAAAAACAG CTCATCGCTC ATTCGATAAC AGAGCAGACA
GCCATTATCG AAGGTAGTAA AAAGCGCCAG GCCTCCATAA GCCACGAAAT AGCACAGCTT
AAAGAACTTA AAAAAGGTGC CCGTGTAAAA CGTATCGAAA AAGAGCTAAC CTTTAATGAC
TCGGTTGATG TCTCTCATAC CGTTACTTGT AATCTTAAAA TGACATTAGC CGAATGTGCA
GAGCAAGGAA AAATCCTTAC TATGCAAAAA GCGGTTAGAG TTTTCAAAGC TAAGCTGATT
GATAGTTTAA CAGAATCTGA ATTAGCAAAG GTCCATGCCG ACGATGTGTC TTTTAACATC
CATGTCATGA ATAGCCAAAC GTTAAAAAAT GAATTTAATG GCAGCAGTAA CTTCGTCACT
CAAATTCAGT CTGAAATGCG TAGCCACCCC TCAAATATTG CCGCCTGCCA ACTTTTAGAA
CTCAAGGAAA GTTACTGTGT CGAGCCAAAA AGTAAATCTG TCTCGATCGC AACAGATAAC
AACTATACCA GTTCGAAGAA GTGGCTCAGT GTGACAATAC GTTCAAACGT CTACGGTGAC
AGAGTCGTCG TCGATGGCGT CGATTATGGC AGTACTCCTA TGGATGTGAT GCTTCCAAGT
GGACCACACC AATTTAAAAT AAGTAAGAAA GGTTATCAGA CTTACCAACG TGAACTAACG
ATAGATAGAG ATCAGACAGT CTGGACCGAA CTCTACGAGC AAAAACGTAG CGATGGTTGG
CAAACTACAG CTGTTACGCC CTAA
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| Protein sequence | MTNRVIQTFI FALSPFFLQA TAGELSIPAA HATDNPVSVL SQKIKGVQRQ QTILAEEIIV
YNKKQRTLLS QQEKAATAVL DAEKNRKKAQ KQLDNQFKAL LNDPSADITA TKNRYQQAWQ
SLQDSQKEKQ LIAHSITEQT AIIEGSKKRQ ASISHEIAQL KELKKGARVK RIEKELTFND
SVDVSHTVTC NLKMTLAECA EQGKILTMQK AVRVFKAKLI DSLTESELAK VHADDVSFNI
HVMNSQTLKN EFNGSSNFVT QIQSEMRSHP SNIAACQLLE LKESYCVEPK SKSVSIATDN
NYTSSKKWLS VTIRSNVYGD RVVVDGVDYG STPMDVMLPS GPHQFKISKK GYQTYQRELT
IDRDQTVWTE LYEQKRSDGW QTTAVTP
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