| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1488 |
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| Symbol | |
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| ID | 5612680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1767595 |
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| End bp | 1768956 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640932354 |
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| Product | leucyl aminopeptidase |
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| Protein accession | YP_001473227 |
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| Protein GI | 157374627 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0260] Leucyl aminopeptidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGATT TACTGATTTC AGGCGTTCCA GGAACACCAC TGACCATCTT ACACACAGAT
TCTTATGCAG ACTGGTTGGC CCAGCAGGAA CAGCAAACAC AAAACTGGCT AAGCAGCACA
CAATTTTCCG GTAAGGGCAT GAGCCTTATT CCCGCAGCAA ATGGCGAACT GGCTCAAGTT
ATTTTAGTTA GCGCTGAGAC TGAATCTTAC TGGTTATGTG GCGATCTCGT TAACCAGCTT
CCCGCAGGAC AATTCGCAAT TACCGGCAGC GAGGAGCAGA TAAAGGTCGC CGCATTTAGC
TGGGGACTGG GTGCCTATAC CTTCGATAGA TATAAGGCCA GTGAAAAGGT CTTTCCTCAG
CTGGTGCTGC CGACTCAGGC TCAAGCCGAT GAAGCACTGA AGATGGTGCG CTCTGTCTCT
ATCGTACGTG ACCTGGTTAA CACGCCGGCT GCAGACATGA TGCCACAGCA TTTAGGTGAA
ATCCTGGAAG GTTTAGCTAA CGAATTTGGC GCAAAGGTAA CACAGATTGT GGGTGACGAA
CTGCTGGAGC AGAACTACCC GACGATCCAT ATGGTAGGCC GCGCCAGTGA GAACCTGCCA
CGTCTTATCG ACCTTACCTG GGGTGATGAA GATGCGCCGA AAGTCACCTT AGTCGGTAAA
GGTGTGTGCT TCGACTCCGG TGGACTGGAT CTTAAACCTG GCGCGGGTAT GCGTCTGATG
AAAAAAGATA TGGGCGGCGC CGCCCACGTT ATCGGCTTAG CACATCAGAT CATGGCCAGT
AACCTGCCGA TCCGCCTCCG TGTGCTTGTT CCTGCGGTAG AAAATGCGGT ATCCGCCAAT
GCGTTCAGAC CCGGTGATGT CATTAAAACC CGTAAAGGGA TCACGGTAGA AATCGATAAT
ACCGATGCAG AGGGCCGTTT GGTCCTGTGT GACGCTCTCG CCGAAGCCAA CAATGATAAG
CCTGAGCTGA TGATAGACTT CGCCACCCTC ACCGGTGCAA TGCGTATCGC GCTGGGGACT
GAGCTACCAG GGTTCTTCAG TAATGACGAT CAGGTGGCTA TAGACATGAC TCAGTCGGGC
CTTAATGTTC AGGATCCAAT CTGGCGCATG CCACTACATA AGCCTTACTT TGAGCTGACC
GGCAGTGATA TCGCCGATCT CGCCAACTGT GGCAAGGTGC CGTTCGGCGG CGCGATTACC
GCAGCCCTCT ATCTCGAAGC CTTTGTCGAT GAAGATATCA GCTGGAGCCA CTTCGATGTG
ATGGCCTGGA ATAACCGTAA ACTGCCGGGT CGCCCTATTG GCGGTGAAGC ATTCGGTATT
CGTGCAGTAT TTGACTACTT GCAGACGCGT TTCAGTAAGT AG
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| Protein sequence | MTDLLISGVP GTPLTILHTD SYADWLAQQE QQTQNWLSST QFSGKGMSLI PAANGELAQV
ILVSAETESY WLCGDLVNQL PAGQFAITGS EEQIKVAAFS WGLGAYTFDR YKASEKVFPQ
LVLPTQAQAD EALKMVRSVS IVRDLVNTPA ADMMPQHLGE ILEGLANEFG AKVTQIVGDE
LLEQNYPTIH MVGRASENLP RLIDLTWGDE DAPKVTLVGK GVCFDSGGLD LKPGAGMRLM
KKDMGGAAHV IGLAHQIMAS NLPIRLRVLV PAVENAVSAN AFRPGDVIKT RKGITVEIDN
TDAEGRLVLC DALAEANNDK PELMIDFATL TGAMRIALGT ELPGFFSNDD QVAIDMTQSG
LNVQDPIWRM PLHKPYFELT GSDIADLANC GKVPFGGAIT AALYLEAFVD EDISWSHFDV
MAWNNRKLPG RPIGGEAFGI RAVFDYLQTR FSK
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