| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1483 |
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| Symbol | |
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| ID | 5610558 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1758793 |
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| End bp | 1760844 |
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| Gene Length | 2052 bp |
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| Protein Length | 683 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932349 |
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| Product | peptidase S9 prolyl oligopeptidase |
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| Protein accession | YP_001473222 |
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| Protein GI | 157374622 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.240771 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGATTTC GCGTGTATAT GACCTATCTC TTCTCGGCGT TACTTCTTAG CTTGCTTGTC
GGTTGCTCTA AGAAAGAGCC TACCGAACCC ACAGAGCTCA TCGATAAACG CAGTGGTTGC
CAGATTGATA CCTATGGTAG CTGGACCTCG CCGATATCTG CCAGCGATGT TTACGGGTTA
TCAGACAATT TTGGTGAGTT ACAGAGCGTC AACGATGCCG TTTATTTTGT ACAGTCCGAC
TCCTCCTCCG ATGGTAGGGT CGGTATTAAG CGTCTCGAGC TCGATGGTAG CGTTTCCGAG
GTTGTTAGCA CCGATTTTGA TGTCCGTTCT AAGGTACACG AATACGGTGG CTCCCCTTTT
CTCGGTATTG GCCAGAGTCT GTTCGTCTCT AAGGCCAAAG ATCAGCTCCT CTATCGCATC
GCCCCTAATC AAGACCCTGT ACCGCTCACC CCCAATGGGA CTCGTCATGC CGATTGCGTA
TCCTATTCCA AAGGCTCCCG TATTATCTGT GTCAGGGAAG ATCATCGCAA GACTGGCATG
CCGGTTTCCG GTCTGGTGGC ACTGAACCTG AATTTCTCCG GCGAGGGGGA GGTACTCAGT
TCAGGCGCCG ATTTTTATTC GGCCCCCAGA GTCTCACCGG ATAATAACCA GATGGCCTGG
ATATCATGGA ACCATCCCAA TATGCCTTGG GATAATACAC AATTATGGGT CGGTGAGCTT
GAGCCTAAGG GAGGGCTGCA TAATGCTCGC AGATTGATTG AGGATCGTGA AGGTTCGATC
ACCCAGCCTC TTTATAGCCC GGACGGTCAG CTCTATTTTG TCGCCGATTT TAATAATTGG
TGGAACCTGT ATCGCATCAA CTCAGAGGGG GAGCTCGAGC ATGTGCTGGA CATGGAGGCG
GAGTTTGCCG TTCCAGATTG GAAGTTGGGT AATCATAACT ATGCGTTTGA GTCTCACAAT
ACCATCATAG CCAGTTATAG CCACAATGGT GTGGCATCGC TTATCCGTAT CTTTCTCGAT
ACCGGGTTGA CTGAGTCAAT CGCGGTGGAT TTTGGTGAGA TATCCCAAGT CGTGAAAGGC
GAAAATGGGA TCTATTTTAT CGGCGCGAAA GTGACGCCGG AAAAGGGAAT ATATAAAGTG
AATGGACGTG GCACTCAGCT TGTTTACGCG CCACAGCTGC CGGTACTCGA TCCTAACTAT
GTCTCCAGAG CCGAAAGTAT CAGCTTTGAA TCCGGGGAAG GTGAACAGGT TTTTGGTTAT
TATTATGGCC CGGTCAACCC CGATTTTATC CCTCCTAAGG ACTCGAGGCC GCCACTGCTG
GTGATGTTAC ATGGCGGGCC AACCTATAAG GCAAGTCTCG CATTCAGACG CGACATTCAA
TTTTGGACCA GCCGTGGGTT TGCGGTGATG GACCTCAATT ACCGTGGCAG CTCGGGCTTC
GGGCGAAAGT ATCGCCAAAG TATCTATGGC CGCTGGGGTA AAGCGGATGT CGAAGATGCG
GTCAGAGCGG CGGGTCATCT GGTGAACAAA GGTTGGGTCG ATGGTTTGCA ACTTGCCATG
CGCGGAAACA GCGCGGGGGG GTTAACGGTG CTGTCGGCAT TAGCCTTCTT CGACACCTTT
AAAGCCGGTG TGAGTTACGC GGGGATAAGC GACATGGAAG TGCTGAGTAA AGAGGCGCAC
AAATTTGAGT CAAAATACCT TGAGCACTTA GTCGGACTCA GCGGCGAAGA GCAGAATATC
TATCGTCAAC GCTCGCCTCT ATATCACCTG GAGGAGCTCG ATGAACCTCT ACTGCTTATT
CAGGGAAGTG ATGATGCGAT AGTGGCCGAG AAGCAGTCCA AGCGAGTGTT CAATGCACTT
AAAGCCAAGG GCGTGCCCGT TTCATACCTG GCTTTCAATG GTGAGGAGCA TGGGTTGAAG
GACCCGCATC ACAAGGTCAA AGCACTCGAG GTGGAATTGG CTTTTTACGG CAAGGTCTTT
GGTTTTACAC CGGCAGGTGA GCAGGCTCTG CTACAGCTGG AAAATGCCCA AAACCTTAAA
CATGGCGAAT AA
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| Protein sequence | MRFRVYMTYL FSALLLSLLV GCSKKEPTEP TELIDKRSGC QIDTYGSWTS PISASDVYGL
SDNFGELQSV NDAVYFVQSD SSSDGRVGIK RLELDGSVSE VVSTDFDVRS KVHEYGGSPF
LGIGQSLFVS KAKDQLLYRI APNQDPVPLT PNGTRHADCV SYSKGSRIIC VREDHRKTGM
PVSGLVALNL NFSGEGEVLS SGADFYSAPR VSPDNNQMAW ISWNHPNMPW DNTQLWVGEL
EPKGGLHNAR RLIEDREGSI TQPLYSPDGQ LYFVADFNNW WNLYRINSEG ELEHVLDMEA
EFAVPDWKLG NHNYAFESHN TIIASYSHNG VASLIRIFLD TGLTESIAVD FGEISQVVKG
ENGIYFIGAK VTPEKGIYKV NGRGTQLVYA PQLPVLDPNY VSRAESISFE SGEGEQVFGY
YYGPVNPDFI PPKDSRPPLL VMLHGGPTYK ASLAFRRDIQ FWTSRGFAVM DLNYRGSSGF
GRKYRQSIYG RWGKADVEDA VRAAGHLVNK GWVDGLQLAM RGNSAGGLTV LSALAFFDTF
KAGVSYAGIS DMEVLSKEAH KFESKYLEHL VGLSGEEQNI YRQRSPLYHL EELDEPLLLI
QGSDDAIVAE KQSKRVFNAL KAKGVPVSYL AFNGEEHGLK DPHHKVKALE VELAFYGKVF
GFTPAGEQAL LQLENAQNLK HGE
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