| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1473 |
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| Symbol | |
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| ID | 5610774 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1747063 |
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| End bp | 1748253 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640932339 |
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| Product | Acetyl-CoA C-acetyltransferase |
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| Protein accession | YP_001473212 |
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| Protein GI | 157374612 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0183] Acetyl-CoA acetyltransferase |
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| TIGRFAM ID | [TIGR01930] acetyl-CoA acetyltransferases |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00066272 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAGTACAG AGCAGTCAAA CCCAGATATC GTAATCGTTG CCGCTAAACG TACCCCTATG
GGTGGATTTC AAGGGGCATT GTCGAGCGTG GCTTCACCGA AGTTGGCCGC GACGGCCATC
AAGGGGCTAA TGGATCAGAC CGGATTGCCT GAAGAGCAGC TCGATGAAGT GTTGATGGGG
TGTGTACTGC CTGCGGGACT GGGTCAAGCT CCGGCTCGTC AAGCGACATT AGGCGCTGGA
CTCCCTCTGT CTGTTGGTGC GACAACGGTG AATAAAGTCT GTGGCTCGGG TATGAAGACC
GTTATGTTGG CTCATGATCT GATTAAAGCT GGCAGTGCCT CAGTCGTTGT TGCCGGTGGC
ATGGAGAGTA TGAGCCAGGC GCCATACCTA CTCGATAAAG CCCGTGGTGG AATGCGTATG
GGGCACGGTA AGGTGATGGA CCATATGTTC CTTGATGGCC TCGAAGATGC CTATACCGGT
GGTGCCATGG GCACATTTGC TCAAGAGACG GCCGATGATT TCAACTTGAC CCGAGAGCAG
ATGGATACAT TTGCGCTGAG CTCACTCGAA AAAGCCAATG CCGCGATTGA AAGCGGTGCC
TTTAAAGAGG AGATAACCCC GGTGACGGTT TCCAGTCGTC GCGGCGATAC CCTTGTCGAT
ACCGATGAGC AGCCGGGCAA TGCACGTCCG GATAAGATCC CAAGCTTACG CCCGGCCTTT
GCTAAAGATG GCACCATCAC GGCGGCGAAC TCAAGCTCTA TCTCAGATGG CGCAGCTGCC
TTGATGTTGA TGACGGCTGA GCAGGCTAAT TCAATGGGAT TACCTGTGCT CGCCACCATC
AAGGGGCATA CCACTCATGC ACAGGAGCCA TCGATGTTTA CGACAGCCCC AGTCGGTGCC
ATGAATAAGC TGCTCGATAA GGTGAACTGG AGCAAGGATG ATGTGGATCT GTTTGAGATC
AACGAAGCCT TTGCCATGGT GACCATGCTG GCTATCTCTG AGCTATCGCT CGATGAATCG
AAGGTAAACG TCAACGGTGG CGCGTGTGCG CTTGGTCATC CTATCGGCTG CTCCGGCGCG
CGATTATTAG TGACGTTAAT CCATGCCCTT AAGGCGCGTG GCCTTAAGCG AGGCGTCGCC
TCCTTGTGTA TCGGTGGTGG CGAGGCGACG GCGATGGCCA TCGAAGTCTA G
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| Protein sequence | MSTEQSNPDI VIVAAKRTPM GGFQGALSSV ASPKLAATAI KGLMDQTGLP EEQLDEVLMG
CVLPAGLGQA PARQATLGAG LPLSVGATTV NKVCGSGMKT VMLAHDLIKA GSASVVVAGG
MESMSQAPYL LDKARGGMRM GHGKVMDHMF LDGLEDAYTG GAMGTFAQET ADDFNLTREQ
MDTFALSSLE KANAAIESGA FKEEITPVTV SSRRGDTLVD TDEQPGNARP DKIPSLRPAF
AKDGTITAAN SSSISDGAAA LMLMTAEQAN SMGLPVLATI KGHTTHAQEP SMFTTAPVGA
MNKLLDKVNW SKDDVDLFEI NEAFAMVTML AISELSLDES KVNVNGGACA LGHPIGCSGA
RLLVTLIHAL KARGLKRGVA SLCIGGGEAT AMAIEV
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