| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1471 |
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| Symbol | |
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| ID | 5610772 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1745326 |
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| End bp | 1745727 |
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| Gene Length | 402 bp |
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| Protein Length | 133 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932337 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473210 |
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| Protein GI | 157374610 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3126] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0482642 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000540477 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGCCAAAGT GGTTTAAGCG AGTGTTACCT TTAGTCGTAG CAGTCGGTGC ATTAGCCGGT
TGTGCAACAC CCAATGCGGG CGTAGAGATC CAGGGTGAGG TTTGGTACAA GGAGCGAATC
GCTCTGCCAC AAGATGCTAT GTTAACGGTG GAACTTAAGG ATGTATCACT GATGGATGCA
CCGGCAATTG TGCTTGCGCA GATAGAGCGA AGCGATGTCA GTACGCCAGC GCCTTTTCAT
TTTTTGATAA ACAGAGATCA GTTTGAGTCG GGCCATACCT ATGCCATCGG TGCCAAAATC
ACCCTCAATG ACAAGCTGTT ATTCATCAAT ACTCAAGCAT ATAACATAGA TTTAGGTTCC
AGTGAGCCTA TGTCAGTGTT GGTACAGAAG GTCGGTCGCT AA
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| Protein sequence | MPKWFKRVLP LVVAVGALAG CATPNAGVEI QGEVWYKERI ALPQDAMLTV ELKDVSLMDA
PAIVLAQIER SDVSTPAPFH FLINRDQFES GHTYAIGAKI TLNDKLLFIN TQAYNIDLGS
SEPMSVLVQK VGR
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