| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1468 |
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| Symbol | |
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| ID | 5610759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1742405 |
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| End bp | 1742998 |
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| Gene Length | 594 bp |
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| Protein Length | 197 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932334 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473207 |
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| Protein GI | 157374607 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3575] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000000729237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000188796 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGAATGACT ATGAACAGCA ATTAAGACAG TGGATAAACG AATCTCCCCG ACATATTCGT
GCATTACTGG CAGCGAATGA ACTGGCGTTG CCACAATGGA TGTTGGCGGC GGGTTTTGTA
CGAAACCTGG CCTGGGATAG GTTGCATGGC TTATCTGTCA GCCCCTTTAC AGATATTGAC
GTGATCTACT TCGACCCGAC GGATCTGTCC AGAGAGGCTG AAAGACGTTA TGAGGCCAAA
TTGAGAGATT TAGTTCCTGA GTATCCCTGG TCAGTTAAAA ACCAAGCCAG GATGCACCTT
AAAAACGGTG ATAAGTCTTA CTCCTCTACG CTCGATGCCA TGGGGTATTG GCCCGAAAAA
GAGACGGCTA TCGCGGTATC TATAGTCGCA GATGGTAAAA CGGCAGCAGA GGGAGCGTTA
ACACTGCAAT GCGGCACTAT AGTATTCAGT TCGGCGTTTG GATTCGAATC ACTATTTCAA
CTTAAGCTCA CTCCTAACCC TAAACGCCCC CTCACACTGT TTAACCATAG AGTACGCACC
AAGGGGTGGC TGGACACATA TCCTCGTTTA CAAATCCTAG CTCGTATGTC TTAG
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| Protein sequence | MNDYEQQLRQ WINESPRHIR ALLAANELAL PQWMLAAGFV RNLAWDRLHG LSVSPFTDID
VIYFDPTDLS REAERRYEAK LRDLVPEYPW SVKNQARMHL KNGDKSYSST LDAMGYWPEK
ETAIAVSIVA DGKTAAEGAL TLQCGTIVFS SAFGFESLFQ LKLTPNPKRP LTLFNHRVRT
KGWLDTYPRL QILARMS
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