| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1464 |
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| Symbol | |
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| ID | 5610860 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1738604 |
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| End bp | 1739476 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932330 |
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| Product | 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
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| Protein accession | YP_001473203 |
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| Protein GI | 157374603 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1575] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
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| TIGRFAM ID | [TIGR00751] 1,4-dihydroxy-2-naphthoate octaprenyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.33918 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000222273 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACCCTT GGATTTTGGC CATTAGGCCT CGTACACTGC CGGCGGCAAT TGGCCCGCTC
TTGGTGGGAA ATATTCTAGC CCTTCAATCA GAACAGTTCA CCTGGCTTAT AGCCTGTACT
TCGATGCTTT GTGCCATCTT ATTGCAGATA GCCGTGAATC TGGCAAACGA CTACTTCGAC
TTTAAAAGTG GGATAGACAC TGAGGAACGA ATAGGCCCGG TGAGAGTCAC CCAAGGTGGA
CTGCTCCCCC CGAATAAAGT CAGGAATGCC ATATTCATCA GTCTCGCACT GGCTCTTTTA
GTTGGCTCGT ACCTTATCTA CCACGGTGGT TGGCCGATCG CCTTTCTGGC GGCGGCATCC
ATATTAGGTG CGCTCGGTTA CAGTGGAGGC CCCTACCCTC TGGCCTCACA TGGGTTGGGA
GAAGTCGCCG CTTTTATCTT TTTCGGTCTG GTTGCTGTTG TCGGAAGTTA TTACCTGCAA
GCGGGTGACA CCAGTACGGC AGCCTGGATT TTAGGCAGCG CCATAGGCTT TCTGAATGCG
GCTATTATGC TGGTCAACAA TACCCGCGAT ATGCAAACCG ATATCAAGGC GGGTAAACAT
ACACTGGCCG CACATATCGG AGAGGGACAA GCCAGACTGC TCTACCAAGC ACTGGTATTC
CTGCCTTTTG CCCTTATCAT AGGTGGTTTT ATTCTCGGTT TCTTGCCAGG GTTACCCGTC
TTACTGGCGG GAGTATCACT CATTCTTGCC CGAAAACTAA ACAGTGAGTT TAGTCATACT
TCCGGTGAAG CCTTAAACCC GCTCCTCGGC AACACGGCCA AACTCACCAT GATATTCAGC
GGACTGTTCA GTATCGGATT GGTATTCGTG TGA
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| Protein sequence | MNPWILAIRP RTLPAAIGPL LVGNILALQS EQFTWLIACT SMLCAILLQI AVNLANDYFD
FKSGIDTEER IGPVRVTQGG LLPPNKVRNA IFISLALALL VGSYLIYHGG WPIAFLAAAS
ILGALGYSGG PYPLASHGLG EVAAFIFFGL VAVVGSYYLQ AGDTSTAAWI LGSAIGFLNA
AIMLVNNTRD MQTDIKAGKH TLAAHIGEGQ ARLLYQALVF LPFALIIGGF ILGFLPGLPV
LLAGVSLILA RKLNSEFSHT SGEALNPLLG NTAKLTMIFS GLFSIGLVFV
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