Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1446 |
Symbol | |
ID | 5610944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1714908 |
End bp | 1715831 |
Gene Length | 924 bp |
Protein Length | 307 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640932312 |
Product | electron transfer flavoprotein, alpha subunit |
Protein accession | YP_001473185 |
Protein GI | 157374585 |
COG category | [C] Energy production and conversion |
COG ID | [COG2025] Electron transfer flavoprotein, alpha subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0198023 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAATTT TAGTAATAGC AGAACATGAT AATGCCAGTT TAAAACTGGA TACTGCCAAA GTTGTTGCCT GTGCTCAGGC TATCGGCAGT GATGTGGATG TGTTGGTTGC CGGACACGAA TGTGGCGCCG TTGTTGAAGC GACCACTAAA CTGTCTGGTG TTAGAAGTGT GTTGGTTGCC GATGCGGCCG TGTACGCTAA CGCTTTTGCA GATAATACTT CTGAGCTGAT CGTAGGCATC GCTTCAGACT ATGAACATAT TTTGGCTGCG GCTACGAGTC ACGGCAAAGA TATGCTTCCT CGTGTTTCGG CGCTTCTAGA TGTGGCTCAA CTGTCAGAGG TCGTTGAGGT GGTTAGCCCT GATACTTTTG TTCGTCCAAT CTATGCGGGT AGTGCAATGG CTACTGTGCA GAGTCTTGAT GATAAGAAAG TGATGACGGT GCGCTCTAGT GCATTCGATG CTGTGGCTAA CGATGGCGCC GCTGTGACGG TATCAATCGA AAAAGTCAGC GATTCACTGT CTCAGTTTGT ATCCCAGAGC CTGACAGAGT CCGAACGCCC GGAACTGGGT GCTGCTTCAG TGGTGGTATC GGGTGGTCGT GGCTTGGGTA GCAGTGATAA CTTCGCTATT TTAGAGCAGC TTGCCGATAA ACTGGGTGGC GCTTTAGGCG CATCTCGTGC GGCCGTTGAC GCAGGATTTG TTCCCAATGA TCTTCAAGTG GGTCAAACGG GTAAAATTGT CGCGCCGGAT CTCTACATTG CGGTGGGGAT CTCCGGTGCT ATTCAGCATC TTGCCGGGAT GAAAGATTCA AAAGTTATCG TCGCAATCAA CAAAGATCCA GAAGCGCCAA TTTTCCAAAT TGCCGATTAC GGCTTGGAAG CCGATCTTTT TGAAGCGGTT CCACAACTGC TCGAGCTCGT ATAG
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Protein sequence | MAILVIAEHD NASLKLDTAK VVACAQAIGS DVDVLVAGHE CGAVVEATTK LSGVRSVLVA DAAVYANAFA DNTSELIVGI ASDYEHILAA ATSHGKDMLP RVSALLDVAQ LSEVVEVVSP DTFVRPIYAG SAMATVQSLD DKKVMTVRSS AFDAVANDGA AVTVSIEKVS DSLSQFVSQS LTESERPELG AASVVVSGGR GLGSSDNFAI LEQLADKLGG ALGASRAAVD AGFVPNDLQV GQTGKIVAPD LYIAVGISGA IQHLAGMKDS KVIVAINKDP EAPIFQIADY GLEADLFEAV PQLLELV
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