| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1441 |
|---|
| Symbol | |
|---|
| ID | 5610954 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | - |
|---|
| Start bp | 1708390 |
|---|
| End bp | 1708773 |
|---|
| Gene Length | 384 bp |
|---|
| Protein Length | 127 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640932307 |
|---|
| Product | putative lipoprotein |
|---|
| Protein accession | YP_001473180 |
|---|
| Protein GI | 157374580 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGC TTTTGATTGC CCCCTTAGTT TTACTTCTCA GCGCATGTGC CGGCGACTAT
AAGTTCAATA CTAACCTCGA TGGTGAAGCT ATCGACGATT ACTTTAAAGC ATCGGATGTC
GCCGTGTTTG AAGGCAATAC CCATCCCTCA GTGCCTTACG AGATTATCGG CTTAGTCGAA
GGTGAAACTT GCCAGGAGAG CGTCAACGAC GCCCCCGCCT CGATAAGTGA GGCTCGCACT
CTTGCCAGAA GGGCCGCCGC CGATAAAGGT GCCAATGCGA TTCTAATCAA GAAGTGTATG
GTATTCGAAG AGAAAAGTCA GGCGTGTATC AGCAGAGCTA TCTGCGTAGG ACAAGCGATT
AAGACACCTG AAACAGACAA ATAA
|
|---|
| Protein sequence | MKTLLIAPLV LLLSACAGDY KFNTNLDGEA IDDYFKASDV AVFEGNTHPS VPYEIIGLVE
GETCQESVND APASISEART LARRAAADKG ANAILIKKCM VFEEKSQACI SRAICVGQAI
KTPETDK
|
|---|
| |