| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1436 |
|---|
| Symbol | engA |
|---|
| ID | 5609846 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sediminis HAW-EB3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009831 |
|---|
| Strand | + |
|---|
| Start bp | 1701194 |
|---|
| End bp | 1702660 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640932302 |
|---|
| Product | GTP-binding protein EngA |
|---|
| Protein accession | YP_001473175 |
|---|
| Protein GI | 157374575 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1160] Predicted GTPases |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR03594] ribosome-associated GTPase EngA |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.465573 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCCAG TTGTGGCCCT TGTTGGCCGA CCTAATGTGG GTAAGTCGAC CCTTTTTAAT
CGTCTGACTC GCACTAGAGA TGCGTTGGTG GCCGACTTTC CTGGGCTGAC TCGGGATCGT
AAATATGGTC GCGCTTTCCT CTCTGGTTAT GAGTTCATCG TTGTTGATAC CGGTGGTATC
GATGGCACCG AAGAGGGTAT TGAAACCCAT ATGGCAGAGC AATCGCTCGC AGCGATTGAA
GAAGCCGATG TGGTGTTATT CCTGACCGAT GCCAGAGCCG GTTTAACGGC AGCAGATCAG
GCTATATGTG AACACCTGCG CCGCCGGGAA AAGACCACCT TTGTGGTTGC TAATAAGGTC
GACGGTATAG ATGCCGACTC GGCTTGTGCC GAATTTTGGG CATTAGGTCT GGGTGAAGTG
TATCAGATGG CTGCAGCGCA AGGGCGCGGT GTGACCAACA TGATAGAGTA CGCGCTAGCT
CCTTACGCCG AAGCGCTTGG TCTTAATCGC GATGGCGATG AAGATGAAGA TGAAGAGGAG
AGAGAGTACA GCGAAGAGGA AGCGGAAGCC GAGCAGAAAC GTCTTCAGGA CCTGCCTATC
AAGATGGCCA TTATTGGTAA GCCGAATGTG GGTAAGTCTA CGCTAACTAA CCGTATTCTT
GGTGAAGAGC GTGTGGTTGT TTATGACTCT CCGGGTACCA CTCGAGACAG TATCTATATC
CCCATGGAGC GAGATGGCCG TGAGTATGTG ATGATTGATA CCGCAGGTGT TCGTCGTCGC
AGTAAGGTGC ATGAGACCGT TGAGAAGTTT TCGGTGATTA AAACACTGAA AGCCGTTGAA
GATTGTAACG TCGTGCTATT GATCATCGAT GCCCGAGAAG GGATCGCGGA GCAAGACTTG
GGCCTATTAG GCTTTGCGCT TAATGCCGGT CGAGCACTGG TGATTGCCGT CAACAAGTGG
GATGGTATCG ATCAGGACAT CAAGGATAGA GTGAAGAGCG AACTCGACCG TCGTTTGGGC
TTCATCGACT TTGCCCGCAT TCACTTTATC TCGGCGCTTC ATGGTACCGG TGTAGGACAC
CTTTTTGAAT CTGTGCAGGA AGCTTATGAC AGTGCTACAC GTCGTGTGAG TACCTCTATG
CTGACTCGTA TCATGCAGAT GGCGCAAGAC GATCATCAGC CTCCATTGGT TAACGGACGT
CGCGTTAAGC TTAAGTACGC TCACGCAGGT GGTTACAACC CACCTATTGT GGTTGTACAC
GGTAATCAGG TTAAGAAGTT ACCGGATTCT TATAAGCGCT TCATGATGAA CTACTATCGT
CGTTCATTGA AGGTCATGGG TACGCCTATT CAGATCCGAT TCCAGGATAG CGCTAACCCA
TTCGAAGGCA TGAACACCAA GAAGCTGACG GTAAGTCAGG AGCGTCGCCG TAAGCGTATG
ATGACGCATA TTAAAGATAA GAAGTAG
|
|---|
| Protein sequence | MIPVVALVGR PNVGKSTLFN RLTRTRDALV ADFPGLTRDR KYGRAFLSGY EFIVVDTGGI
DGTEEGIETH MAEQSLAAIE EADVVLFLTD ARAGLTAADQ AICEHLRRRE KTTFVVANKV
DGIDADSACA EFWALGLGEV YQMAAAQGRG VTNMIEYALA PYAEALGLNR DGDEDEDEEE
REYSEEEAEA EQKRLQDLPI KMAIIGKPNV GKSTLTNRIL GEERVVVYDS PGTTRDSIYI
PMERDGREYV MIDTAGVRRR SKVHETVEKF SVIKTLKAVE DCNVVLLIID AREGIAEQDL
GLLGFALNAG RALVIAVNKW DGIDQDIKDR VKSELDRRLG FIDFARIHFI SALHGTGVGH
LFESVQEAYD SATRRVSTSM LTRIMQMAQD DHQPPLVNGR RVKLKYAHAG GYNPPIVVVH
GNQVKKLPDS YKRFMMNYYR RSLKVMGTPI QIRFQDSANP FEGMNTKKLT VSQERRRKRM
MTHIKDKK
|
|---|
| |