| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1433 |
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| Symbol | hisS |
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| ID | 5611551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1697982 |
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| End bp | 1699256 |
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| Gene Length | 1275 bp |
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| Protein Length | 424 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932299 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_001473172 |
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| Protein GI | 157374572 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00243432 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.636484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | GTGGCAAAAC AGATCCAAGC GATTCGCGGA ATGAATGACA TTCTGCCTAC CCAAAGCCCT
CTATGGCAAA AACTAGAAAC CGTACTGAGA GAAACTGTCA GTGCTTACGG CTATAGTGAA
ATCCGTACTC CAATCGTAGA GAGTACAGAC CTTTTTAAAC GTTCAATCGG TGAAGTTACT
GATATCGTTG AAAAAGAGAT GTATACCTTC GATGACAGAA ACGGTGACAG CTTAACACTC
CGCCCCGAAG GTACTGCTTC GACGGTACGT GCGGGTAACG AGCATGGCTT GTTATATAAC
CAAGAGCAGC GTCTTTGGTA CATGGGTCCC ATGTTTAGAC ATGAACGTCC ACAAAAGGGT
CGTTACCGTC AATTTAATCA GTTCGGTGTT GAAGTCTATG GCATAGGTAG TGCAGACGTC
GATGCTGAAG TCTTGATGTT GTCGCACCGC CTATGGGAAA AGTTAGGCAT AACCGAGCAT
GTGACCTTAG AGTTGAACAC ACTAGGCGAC CCGGCTGAGC GTGCGGCCTA TCGTGACGCG
CTTATCGCTT ATCTTGAGCA GTTTAAAGAA CAGCTCGATG AAGAAAGTCA GCGCCGTATG
TATACCAACC CACTGCGCGT TCTCGATACT AAAAATCCTG ATGTACAGGC CCTGTTAACC
GATGCGCCTG AGCTGATGGA GTATCTTGGT GAAGAGACCC GTGCACATTT TTCACATTTA
TGTGAACTCT TAGACGCCGT TGGTATCAAA TACGTGATTA ATCCACGTTT GGTTCGTGGT
TTAGATTACT ATAATCGCAC CGTTTTCGAG TGGGTGACAT CGAGCCTGGG CGCTCAAGGT
ACTGTACTGG CAGGCGGACG TTACGATGGC CTGGTTGAGC AATTGGGAGG TAAGAATACT
CCTGCCGTTG GTTTCGCCAT GGGACTCGAG CGTATCGTGT TGATGCTTGA AACACTCGAA
TTAACCAAAG ACATCCCTGC TACTGTCGAT GTTTATGTCA CTGCTATGGG CGATGCGAGT
AAGATTGAAG CGATTAAGAT TGCCCAGTCA CTGAGAAGTG AACTGCCTCA TCTGAGGGTG
ATGAGTCATT GTGGTGGTGG AAACTTCAAG AAGCAGATGA AACGTGCAGA TAAGAGTGGT
GCGCAAGTGG CCTTAGTGAT TGGTGAAGAT GAACTTGCCA ATAATCAGGT TGCCGTTAAA
TATCTGCGTG AGAAAAAAGA ACAAGAATTA GTTGCCCGCG ATGCTTTGGC AACTTATATT
GCAGAACTGA TTTAG
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| Protein sequence | MAKQIQAIRG MNDILPTQSP LWQKLETVLR ETVSAYGYSE IRTPIVESTD LFKRSIGEVT
DIVEKEMYTF DDRNGDSLTL RPEGTASTVR AGNEHGLLYN QEQRLWYMGP MFRHERPQKG
RYRQFNQFGV EVYGIGSADV DAEVLMLSHR LWEKLGITEH VTLELNTLGD PAERAAYRDA
LIAYLEQFKE QLDEESQRRM YTNPLRVLDT KNPDVQALLT DAPELMEYLG EETRAHFSHL
CELLDAVGIK YVINPRLVRG LDYYNRTVFE WVTSSLGAQG TVLAGGRYDG LVEQLGGKNT
PAVGFAMGLE RIVLMLETLE LTKDIPATVD VYVTAMGDAS KIEAIKIAQS LRSELPHLRV
MSHCGGGNFK KQMKRADKSG AQVALVIGED ELANNQVAVK YLREKKEQEL VARDALATYI
AELI
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