| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1426 |
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| Symbol | |
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| ID | 5610231 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1689639 |
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| End bp | 1690088 |
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| Gene Length | 450 bp |
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| Protein Length | 149 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932292 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473165 |
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| Protein GI | 157374565 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2259] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.165574 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGAATTAT TCATGCAGAA ATTCATCAAG ACTAATCCGA CTCTTGCACC ATTAACACTC
AGGGTGCCTA TCGGTATAAT CTTCATAGCT CACGGCGCCC AAAAATTATT TAGCTGGTTT
GGAGGCTACG GACCGGATGT CACGGGTCAA TGGCTGGACT CTGTAGGATT AGCTCCCGGT
TTCTTTATGG CGCTTTTAGC GGGCAGTAGT GAGTTTCTTG GAGGCTTACT GATATTCGTT
GGATTAGCCG TTCGTCCAAC GGCAGCCATA TTGGCGTTTA CTACGCTAGT GGCTATCGTC
CCGGTTCATA GCAATAACGG TTTATTCATG TCCAATAATG GTTATGAGTT TGGCCTGTCC
CTCTTAGCCG CCTCTCTCTC TTTGATGATA TCCGGCGCAG GACGACTATC CATTGACCAA
CTTGCCAACA AACAGCTATT AAAACGATAG
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| Protein sequence | MELFMQKFIK TNPTLAPLTL RVPIGIIFIA HGAQKLFSWF GGYGPDVTGQ WLDSVGLAPG
FFMALLAGSS EFLGGLLIFV GLAVRPTAAI LAFTTLVAIV PVHSNNGLFM SNNGYEFGLS
LLAASLSLMI SGAGRLSIDQ LANKQLLKR
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