| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1418 |
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| Symbol | |
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| ID | 5609702 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1682026 |
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| End bp | 1682850 |
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| Gene Length | 825 bp |
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| Protein Length | 274 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932284 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473157 |
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| Protein GI | 157374557 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3228] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.955428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAGGCA TTATATTAGT CAGTATTATA GGTATCGCGG CGATAAGCTG GATAGCCTCG
CACTCATGGC GGGTCGAGCG GCAACGAAAG CAGATAATCA AGCACGCATT TCCAAAGCGA
TGGAGGGATA TCCTTAAGAG ACGAATGCCC TATTTCCGCA CACTCCCTAC CGATCTTCAA
CTACAGCTCA AGCAACTTAT TCAGGTATTC ATCAATGAAA AACAGTTCGT CGGCTGTGAC
GGTATAGAGA TAGACGATGA GATCCGCGTA ACGATAGCGG CACAAGCCTG CCTGCTGTTA
TTAAATCGTC ACACCGACTT CTACCCTAAC CTCAAACAGA TATTAGTTTA CCCCTCAATA
TTTATCGTCA ATAACAAGGA GCAGAGAGAT GGCGGCGTCA TCTCAGAACG GCAACGCATT
CTTTCCGGTG AGTCATGGCA ACAGGGAAAA GTGATACTCT CATGGCAAAC CACTCAGGCC
GATGCGGCCA GCCCGGGAGA TGGCAGTAAT GTCGTACTCC ATGAATTTGC TCATCAGCTC
GATCAAGAAG CGGGCGACGC CAATGGTGCA CCACTGTTGA GTAGAGTGAG TGATTACTCG
ACCTGGTCTG AGGTGCTTAG CGAGGAGTAC GAAACATTAC GACTCGATGC TCAGCAAAAC
ACACCATCAA TTTTCAGTTA TTATGGTGCT ACCAGCCCGG CCGAATTTTT TGCGGTGATA
ACAGAGGTCT TCTTCGAACG TCCCGAGGAG TTTTACCTGC AGCATAAGAG TCTCTACAAA
GAGCTGAGTG TATTCTTCAA CCTGGATCCG ATTAACTGGC AATAA
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| Protein sequence | MLGIILVSII GIAAISWIAS HSWRVERQRK QIIKHAFPKR WRDILKRRMP YFRTLPTDLQ
LQLKQLIQVF INEKQFVGCD GIEIDDEIRV TIAAQACLLL LNRHTDFYPN LKQILVYPSI
FIVNNKEQRD GGVISERQRI LSGESWQQGK VILSWQTTQA DAASPGDGSN VVLHEFAHQL
DQEAGDANGA PLLSRVSDYS TWSEVLSEEY ETLRLDAQQN TPSIFSYYGA TSPAEFFAVI
TEVFFERPEE FYLQHKSLYK ELSVFFNLDP INWQ
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