| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1415 |
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| Symbol | |
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| ID | 5609886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1678176 |
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| End bp | 1679501 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640932281 |
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| Product | isocitrate lyase |
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| Protein accession | YP_001473154 |
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| Protein GI | 157374554 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2224] Isocitrate lyase |
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| TIGRFAM ID | [TIGR01346] isocitrate lyase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATAAGG CATCGATACC TGTTTCACGG CAGGAGCAGA TTCAAGCCAT TGAGAAGGAT
TGGAGTGAGA ACTCTCGTTG GAAAGGGGTC ACCCGTCCCT ATACGGCCGA GGATGTGGTG
GCCCTGCGAG GCTCAATGGT CCCGGAGAAT ACGTTGGCGA AACGTGGCGC CGCCAGATTA
TGGGAACTGG TTAACGGAGG CGCTAAGAAA GGCTACGTTA ATTCACTCGG CACCTTAAGC
GGTGGTCAGG CGGTTCAGCA GGCGAAGGCG GGGATAGAGG CGATATACCT GTCGGGTTGG
CAGGTTGCGG CCGATGCGAA TTTGGCCGGG GCTATGTACC CCGATCAGTC ACTCTATCCG
TCTAACTCGG TACCGGCGGT GCTAAATAAT ATCAATAGTG CGTTTCGCCG TGCAGATCAG
ATCCAGTGGA GCAATGGACT CAACCCTGGG GATGAAGGTT ACAGAGACTA TTTCTTACCC
ATAGTTGCCG ATGCTGAAGC TGGCTTCGGT GGAGTACTCA ATTCGTTCGA GTTGATGAAG
AGTATGATCG ATGCCGGTGC TGCCGGGGTA CATTTTGAAG ACCAACTCGC ATCGGTGAAA
AAATGTGGCC ACATGGGGGG CAAGGTGCTC GTTCCGACGA AAGAGGCGAT CCAAAAACTG
GTGAGTGCGA GGCTGGCAGC GGATGTGTGT GGGGTGGAGA CCTTAGTCAT AGCCCGCACC
GATGCCAACG GAGCCGATCT GCTGACCTCA GATTGTGATC CCTATGACAG TGATTTCATC
ACGGGAGATA AATGTGAGGA GGGGTTCTAC CGTGTAAAAG CCGGAATTGA GCAGGCCATA
TCCCGTGGTT TGGCTTACGC CCCTTTTGCC GATCTTATCT GGTGTGAAAC AGAGACGCCC
TGTCTCGATG AGGCCAGAAA GTTTGCCGAT GCCATTCACG AGCACTTTCC GGATCAACTG
TTGGCTTACA ACTGCTCCCC CTCATTTAAC TGGAAGAAAA ATTTGGATGA CGAGACCATC
TCGCATTTTC AGAGAGAGCT GTCGCAGATG GGGTATAAGT ATCAATTTAT CACCTTAGCG
GGCATTCACA GCATGTGGTA CAACATGTTC GATCTGGCCT ATGACTGTGC TCGGGGAGAG
GGGGTTAAAC ACTATGTCGA AAAGGTGCAG GAGGCGGAAT TTGCGGCGGC AAGGAAAGGC
TATACCTTCG TGGCACACCA GCAAGAGGTG GGCACAGGCT ACTTCGACCG GGTAACGAAT
GTGATCCAGG GCGGTCACTC CTCGGTGACG GCATTAACCG GCTCGACCGA AGAGAAACAG
TTTTAA
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| Protein sequence | MNKASIPVSR QEQIQAIEKD WSENSRWKGV TRPYTAEDVV ALRGSMVPEN TLAKRGAARL
WELVNGGAKK GYVNSLGTLS GGQAVQQAKA GIEAIYLSGW QVAADANLAG AMYPDQSLYP
SNSVPAVLNN INSAFRRADQ IQWSNGLNPG DEGYRDYFLP IVADAEAGFG GVLNSFELMK
SMIDAGAAGV HFEDQLASVK KCGHMGGKVL VPTKEAIQKL VSARLAADVC GVETLVIART
DANGADLLTS DCDPYDSDFI TGDKCEEGFY RVKAGIEQAI SRGLAYAPFA DLIWCETETP
CLDEARKFAD AIHEHFPDQL LAYNCSPSFN WKKNLDDETI SHFQRELSQM GYKYQFITLA
GIHSMWYNMF DLAYDCARGE GVKHYVEKVQ EAEFAAARKG YTFVAHQQEV GTGYFDRVTN
VIQGGHSSVT ALTGSTEEKQ F
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