| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1410 |
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| Symbol | |
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| ID | 5613710 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1671422 |
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| End bp | 1671937 |
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| Gene Length | 516 bp |
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| Protein Length | 171 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932276 |
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| Product | SmpA/OmlA domain-containing protein |
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| Protein accession | YP_001473149 |
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| Protein GI | 157374549 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2913] Small protein A (tmRNA-binding) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAATTA AAAAGCAAAG TCTTACCCTT TTGGGCGCAG CTGCGCTCTC GTTATCGCTC
AGTGCCTGTA GCGTTTTTGA CTGGTTGATC TATAAGCCAG ATATTCCGCA AGGCAACTAC
ATGGAAACTC AACAGGTTGA AAAACTGCGT ATTGAGATGA CCAAAGAGCA AGTTGAATAC
ATTCTCGGAC GTCCGGTGCT TCGTGACAGC TTCTCCGATG ACACTTGGTA CTATGTATAC
CATTACAAGA GTGGACGTGA TGCCAGCATC ACACATAAAG AGCTGATCAT ACATTTTGAA
GGTGAGATGC TGACGAAGGT CGAGGGTGAT TATGAGTTAG CTGAAGACTT TAATACCCCA
CTGGATCAGA GCCGTCTACC CGATGCCCCT ATGACTGGAG TCGGAGCCGA TCTCGAAGAA
GGTACTGAGC CTTTGATCCC TGAGCAACGC CCGGATAGCA AGCCTTTGAT TGAAGAGGTT
GAGCCGGAAG CACAGGCTAA GAAGAAATTT GAATAG
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| Protein sequence | MTIKKQSLTL LGAAALSLSL SACSVFDWLI YKPDIPQGNY METQQVEKLR IEMTKEQVEY
ILGRPVLRDS FSDDTWYYVY HYKSGRDASI THKELIIHFE GEMLTKVEGD YELAEDFNTP
LDQSRLPDAP MTGVGADLEE GTEPLIPEQR PDSKPLIEEV EPEAQAKKKF E
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