| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1408 |
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| Symbol | |
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| ID | 5613708 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1670199 |
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| End bp | 1670630 |
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| Gene Length | 432 bp |
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| Protein Length | 143 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932274 |
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| Product | cyclase/dehydrase |
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| Protein accession | YP_001473147 |
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| Protein GI | 157374547 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2867] Oligoketide cyclase/lipid transport protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCACAGA TATCCCGCAG CGTGTTAGTG CGCTTTAGTG CAATGCAGAT GTATGAAATT
GTTAATGATG TCGAATCTTA CAAAGAGTTC CTACCCGGCT GCGTCGGTGG CAAGGTGTTG
GAATTCGATG GTGAAACCAT GTTGGCTTCC GTCGACGTCT CGAAGGCGGG GATCAGCAAA
ACCTTTACGA CCAGAAATCA AATTATCCCA GGGAAAAGCA TTCAATTAGT GCTCGAAAAT
GGTCCCTTTA ATCACCTGGT CGGTGAGTGG CGCTTTACTG AACTGACAGA AGATGCGTGT
AAAATTGACT TTGAGTTGAA CTTTGAGTTT TCCAGCACTC TGGTGGATAT GGCCTTCGGT
AAAATTTTCA AAGAGTTGAT GGCTTCGATG GTGACAGCTT TTACCGGTAG AGCCAAAGTT
ATATACAGAT AG
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| Protein sequence | MPQISRSVLV RFSAMQMYEI VNDVESYKEF LPGCVGGKVL EFDGETMLAS VDVSKAGISK
TFTTRNQIIP GKSIQLVLEN GPFNHLVGEW RFTELTEDAC KIDFELNFEF SSTLVDMAFG
KIFKELMASM VTAFTGRAKV IYR
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