| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1407 |
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| Symbol | smpB |
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| ID | 5610280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1669480 |
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| End bp | 1669974 |
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| Gene Length | 495 bp |
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| Protein Length | 164 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640932273 |
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| Product | SsrA-binding protein |
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| Protein accession | YP_001473146 |
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| Protein GI | 157374546 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0691] tmRNA-binding protein |
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| TIGRFAM ID | [TIGR00086] SsrA-binding protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCTAAGA AAAACGCAAA AAAATCAAAA AACTCCTCCG CATCTATTGC GCGTAATAAA
CGTGCGACAT TCGACTATAA GTTCGAAGAG AAGATGGAAG CAGGTCTATC CCTGATGGGA
TGGGAAGTGA AGTCTATTCG TATGGGCAAG GTTAACTTGT CTGAAAGCTA TGTATTTATG
AGAGATGGCG AAGCCTTTCT TTTCGGATGT ACCATAGCCC CATTGAATAC CGCATCCACA
CATGTTGTCT GTGATCCAAT GCGTTCGCGT AAGCTGCTAC TTAAACGTAA AGAGCTAGAT
AAGTTGCAGG GACTCGTCGA TCGTAAGGGT TACTCTATCG TACCAATCTC TATGTATTGG
CAAAAAGGCG CATGGGTAAA AATTGAGATC GGTCTTGGTA AAGGTAAGAA AGAGCACGAT
AAGCGTGACG ATACCAAAGA CAGAGAGTGG CAGATTGAAA AGGCTCGAAC CATGAAAAAG
GCGGTTCAAC AGTAA
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| Protein sequence | MAKKNAKKSK NSSASIARNK RATFDYKFEE KMEAGLSLMG WEVKSIRMGK VNLSESYVFM
RDGEAFLFGC TIAPLNTAST HVVCDPMRSR KLLLKRKELD KLQGLVDRKG YSIVPISMYW
QKGAWVKIEI GLGKGKKEHD KRDDTKDREW QIEKARTMKK AVQQ
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