| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1406 |
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| Symbol | |
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| ID | 5612621 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1668099 |
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| End bp | 1668719 |
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| Gene Length | 621 bp |
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| Protein Length | 206 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640932271 |
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| Product | cytoplasmic chaperone TorD family protein |
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| Protein accession | YP_001473145 |
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| Protein GI | 157374545 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3381] Uncharacterized component of anaerobic dehydrogenases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCAGA TTAACAATCA GGATATGTAT GTCGCCGCAC TGAGGGTATT ACATAATCAA
TTTTACCATA GCCCCACTTC GGCTCGTCTC AAGGAGTTGG AGCAAAGTGG CCTGCTGGAT
ACCTGGCCGA CACTTGGATC CGCCAGAGTG TTGAATCAAG CCATAATCGA GATAAGCCAT
TCCCTGCAAC GGGATGAACT TAAAGAGGTA GAGATGGATT ACTACCGTCT GTTTGTCGGT
CCGGGCCCGG TGTTGGCCTA CCCCTGGGGC TCTGTGTATA CCGAACGGGA GAACCTGGTG
TGTGGTGAGA GTACCTGGGC GTTTCAGAAG TTTTGCCGGG CGCATGGTGT GGATCTACAA
CCGGAACAAA CTGGGCCGAC GGATCACTTC GGATTGATGC TGGCGATTCT GGCAGCACTG
CTTGAACAGG GTAATGATCA GGGGATAAAC GAATTGCTGC AACAACATCT GATGCCCTGG
GCACCGAGAA TGCTGGAGCT TGTCTGTCAA CACGCCGCAA CGGATCACTA CAGGGGCTTT
GCCAAACTGA CAGCGCAGCT GCTCGATTGT TTGGTCAATG AACGGGCACT ATTGATATCG
CAGAAAGTGT TGTACTTCTG A
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| Protein sequence | MKQINNQDMY VAALRVLHNQ FYHSPTSARL KELEQSGLLD TWPTLGSARV LNQAIIEISH
SLQRDELKEV EMDYYRLFVG PGPVLAYPWG SVYTERENLV CGESTWAFQK FCRAHGVDLQ
PEQTGPTDHF GLMLAILAAL LEQGNDQGIN ELLQQHLMPW APRMLELVCQ HAATDHYRGF
AKLTAQLLDC LVNERALLIS QKVLYF
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