| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1402 |
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| Symbol | |
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| ID | 5613866 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1662030 |
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| End bp | 1662980 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640932267 |
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| Product | cytochrome c family protein |
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| Protein accession | YP_001473141 |
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| Protein GI | 157374541 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain
[TIGR03508] decaheme c-type cytochrome, DmsE family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATGGT ATCAAATTAC CATGCGACTG CTCAGTGTTG TTATATGCTT GAGTGTTTCA
TCTGGAGTCA GTTCGACTCC TTGGAATGAT TTAACGGAAG GTGTATTAAC TGAGCTGTTG
ATGCAGAAAT TTTCTGAAGG GAAGTATTCC AAAAAAGGCG CCGACTCCTG TCTTATGTGT
CATAAGAAGA GTGATACCGT CATGGCTATC TTCGATGGTG TTCATGGCAA GATGAATCAC
GCCGATGCTC CTATGGCAGG CCTGCAATGC GAAGCCTGTC ATGGCCCGCA GGGCAAGCAT
AACAGGGGCG GAAAGGAGCC GATGATTGCG TTTGGCAAAG AGAGCAAGCT TTCTGCCGAA
AGTAAAAACA GTGTCTGTCT GGGCTGTCAC AACGATCCTG AGCAGATGGC TTGGCATAGC
AGCAACCATA ATCTCAATGA AGTGGCCTGC AGCGATTGCC ATCAGCTGCA TGCCGCCAAA
GATCCTGTGC TCGACAAGCT CAGTGTCAAC GATAGCTGCA CCAGCTGTCA CGCCCAGGCA
AAAGCCGATA TGAACAAGCG CTCATCTCAC CCGCTGAAAT GGGACCAGAT GACCTGTATC
GATTGTCACT CTCCTCACGG CTCCATGAGC GAAAGTGCCC TGAATAAACC GACAATTAAT
GACACCTGCT ATTTATGTCA CAGTGAGAAG CGTGGACCGG TTTTATGGGA ACACGCACCG
GTTACCGAGA ACTGTGTTAC CTGTCATAAC CCCCATGGCA GCGTCAACGA AGGCATGCTG
AAGAGCCGTG CGCCTCAACT CTGTCAGCAG TGTCATGCGC CCGATGGTCA TGCCAGCCGA
GTGGTGCAGG AACCGGGAAT GGATGCCTTC GGCGGTGGTA AGAGTTGCTT GAACTGTCAT
AGCAAGATCC ATGGTTCTAA CCATCCATCA GGCAGCCTGC TGCAGCGCTA A
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| Protein sequence | MKWYQITMRL LSVVICLSVS SGVSSTPWND LTEGVLTELL MQKFSEGKYS KKGADSCLMC
HKKSDTVMAI FDGVHGKMNH ADAPMAGLQC EACHGPQGKH NRGGKEPMIA FGKESKLSAE
SKNSVCLGCH NDPEQMAWHS SNHNLNEVAC SDCHQLHAAK DPVLDKLSVN DSCTSCHAQA
KADMNKRSSH PLKWDQMTCI DCHSPHGSMS ESALNKPTIN DTCYLCHSEK RGPVLWEHAP
VTENCVTCHN PHGSVNEGML KSRAPQLCQQ CHAPDGHASR VVQEPGMDAF GGGKSCLNCH
SKIHGSNHPS GSLLQR
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