Gene Ssed_1393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSsed_1393 
Symbol 
ID5613704 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sediminis HAW-EB3 
KingdomBacteria 
Replicon accessionNC_009831 
Strand
Start bp1653684 
End bp1653983 
Gene Length300 bp 
Protein Length99 aa 
Translation table11 
GC content56% 
IMG OID640932258 
Productputative monovalent cation/H+ antiporter subunit G 
Protein accessionYP_001473132 
Protein GI157374532 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1320] Multisubunit Na+/H+ antiporter, MnhG subunit 
TIGRFAM ID[TIGR01300] monovalent cation/proton antiporter, MnhG/PhaG subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGCAA TTGATCTCAT CTCCTCCGTC CTGCTCATCG CAGGGGGCGT TTTCTTTCTG 
GCTGGCACCC TGGGCCTGTT GCGGTTTCCT GATGTTTACA CTCGCCTGCA TGCCTTGACT
AAAGGCGACA ACGTGGGCCT TGGGCTGGTG ATCGCAGGGC TGGCCGTTCA GGTACAAAGC
TGGTTTACCG TGGGCAAGCT GCTGATGATT TGGGTATTGG TGATGCTCGC CAGCGCCAGT
ATTTCTCATT TGATTGCAAG ACGTGCTTTG CTGCGGGGGA TCAAGCCGTG GAAGCGCTGA
 
Protein sequence
MTAIDLISSV LLIAGGVFFL AGTLGLLRFP DVYTRLHALT KGDNVGLGLV IAGLAVQVQS 
WFTVGKLLMI WVLVMLASAS ISHLIARRAL LRGIKPWKR