Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1392 |
Symbol | |
ID | 5613231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1653419 |
End bp | 1653697 |
Gene Length | 279 bp |
Protein Length | 92 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640932257 |
Product | multiple resistance and pH regulation protein F |
Protein accession | YP_001473131 |
Protein GI | 157374531 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAACCC TATATTTCAC ACTGGCGTTG TTCCTCTTGC TGAACCTCAT TGTCGGAATG TGGCGGGTGT TGCGCGGTCC CACCGCCGCG GATCGCATGT TGACGGCACA GTTGTTCGGC ACCACATCAG TGGCTGCAAT GTTATTGCTG GCTCAGGCGA CGGACAAACC GGCCCTACGT GATGTGGCAC TGGTATTTGC CTTACTTGCG GCGGTAACTG CGGTAGCTTT TATCCGTCGC GCCTGGCGGG TTAGGGAGAA AAAGCATGAC GGCAATTGA
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Protein sequence | MQTLYFTLAL FLLLNLIVGM WRVLRGPTAA DRMLTAQLFG TTSVAAMLLL AQATDKPALR DVALVFALLA AVTAVAFIRR AWRVREKKHD GN
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