| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1389 |
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| Symbol | |
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| ID | 5613159 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1650888 |
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| End bp | 1651445 |
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| Gene Length | 558 bp |
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| Protein Length | 185 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932254 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473128 |
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| Protein GI | 157374528 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4094] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAGTTT TGTTATCGGG AATGGTGCTG TTTATCGCCA TTCATCTATT TCCAACTCAG
GTACAAGCTC GGCAAGCCTT GATAGGTAAA TTGGGAAGAG TCCCCTATCT GGCGCTGTTT
TCCACCATTT CACTTATCGG TTTTGTACTG ATCATCAATG GCTTTGGCAT GGCCTCTAAG
GAGCAACTCT GGCAACCACT GTCTTTCGCC AGACCACTGG TACACGCCAT CATGCCACTT
GTGTTTATCT TGCTTATTTC AGCCTATCTC GATACCTATA TACGCGCAAA ACTCAAACAT
CCCATGTTGA TTGCCACCTG CTTATGGGCC TTAGTGCATT TGCTAGCCAA CGGTGACCTG
GCCTCCAGCG TACTATTTGG CGGATTCTTC CTCTATGCTT TAGCCGACAT TTTACTGGCA
AAATCCAGAG ACAGTATCGT GCCCAAGGGT GAACCTAAGG CAAAGTTCGA CGTCATCGCG
GTGGTGGTTG GACTAATTGT CTATGCTTTG GTGCTGCGCG GCCACCAAAC ACTATTCGGT
GTGTCCGTGA TCGACTGA
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| Protein sequence | MIVLLSGMVL FIAIHLFPTQ VQARQALIGK LGRVPYLALF STISLIGFVL IINGFGMASK
EQLWQPLSFA RPLVHAIMPL VFILLISAYL DTYIRAKLKH PMLIATCLWA LVHLLANGDL
ASSVLFGGFF LYALADILLA KSRDSIVPKG EPKAKFDVIA VVVGLIVYAL VLRGHQTLFG
VSVID
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