| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1386 |
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| Symbol | |
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| ID | 5613156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1649064 |
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| End bp | 1649486 |
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| Gene Length | 423 bp |
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| Protein Length | 140 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932251 |
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| Product | OsmC family protein |
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| Protein accession | YP_001473125 |
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| Protein GI | 157374525 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1764] Predicted redox protein, regulator of disulfide bond formation |
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| TIGRFAM ID | [TIGR03561] peroxiredoxin, Ohr subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.234237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAGCAC TATATAGCAC TCAAGCAACC GCCAGCGCAG GACGAAACGG CAATGTCGCG
ACAGATGATG GCAAGCTATC TTTAGCATTA AGCTACCCTA AAGAGATGGG AGGCTCGGGA
GAGGCGACCA ACCCGGAACA ACTTTTTGCC GCAGGTTATA GTGCCTGTTT TTCAAATGCC
CTGCTGCATG TTGCACGTGA AGGTAAGTTG GTCTTAACTC AAGCGCCGGT AACTGCAACG
GTTGGAATTG GAGTTAGAGA AGAGGGGGGA TTTGGATTAT CCGTTGCCTT GGCCGTGGAG
CTGGAGTTGC CTCAAGCACA AGCCGTAGCT TTGGTGAGGA ATGCGCATCT TGTCTGTCCT
TATTCAAATG CAGTTCGTAA TAACATCGAT GTGATGCTAA CGGTAAACGG CGAGAGCATC
TAA
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| Protein sequence | MKALYSTQAT ASAGRNGNVA TDDGKLSLAL SYPKEMGGSG EATNPEQLFA AGYSACFSNA
LLHVAREGKL VLTQAPVTAT VGIGVREEGG FGLSVALAVE LELPQAQAVA LVRNAHLVCP
YSNAVRNNID VMLTVNGESI
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