| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1355 |
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| Symbol | |
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| ID | 5611735 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1611453 |
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| End bp | 1612682 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 640932220 |
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| Product | sodium-glutamate symporter |
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| Protein accession | YP_001473094 |
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| Protein GI | 157374494 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0786] Na+/glutamate symporter |
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| TIGRFAM ID | [TIGR00210] sodium--glutamate symport carrier (gltS) |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCTC ACATCCTTGA GATTAAAGAC TTTGTCTCCT TTACCTTAGC GATCATTGCG
CTATTTATCG GTAAAGCGAT CATCTCCCGT TACGAGCTGT TGCGTAAGTA TAGTATTCCC
GAGCCAGTGG TTGGGGGATT TGCCTGCGCC GCTATTGTGG GGATCCTCTA TTATGCCTTT
GGCTTACAAA TTGAGTTTAA CTTGGATGTC AGAGATATCT TGCTGCTCTA CTTCTTTGCC
GGAATTGGCT TGAAGGCCGA CTTCGCGACT CTGCTCAAAG GGGGAAAGCC CCTGTTGATC
CTGATACTTC TTTCCAGTGT GTTTATCTTC TTACAGAACT TCACGGGAGT GAGTGTTGCC
ACTCTATTTG GCTTAGATCC CAAAGCGGGG CTGATGTCTG GCTCTATCTC GCTTATCGGT
GGCGTAGGTA CCGCTATGGC ATGGACCCCC ACCTTTGTGG AGGAGTTAGG TATCGCTAAT
GCCAATGAGT TGGGTATCGC ATCGAATACA TTAGGCTTAA TCTCTGCCTG TGTTATCGGT
GGTCCCATCG CGGCTTACCT GATGAAGCGC CACCATATTA AGCCCAACCT GGATGAAGAG
CTCGATATCG GTGCCAGCCA TAAGAGTAGT TCAAACCATA TTCAGGTAGA TTATTTTGGC
GTACTCAGAG CCTGGCTATG GTTGAACGTG ACACTGATTA TTGGTTACTT TATCGATCTG
GCGATGCAGG AGGCCGGACT TAAGTTGCCT ATGTTTGTTG CCTGTCTGCT CTCCGGTATT
ATTATCGGCA ATGTCGGCCG TGCACTTTTG AATAGGAAGA AGGACAGAGA CCTTACCTAT
GTGGAGGAGG CTTCCAGAGG ATTATCATTA ATTCAGGATA TCTGTTTAGG TATGTTCTTA
ACGATGGCGC TGATGAGCCT GAAGATATGG GAGCTCGAGG GCAGTCTATT TTATATTTCG
GTCGTGATGT CGATACAGGT ACTGTTGTCG GTGTTGTTTA CCGTCTTTAT CGTATTCCGA
GCCATGGGCA AAGATTATGA GGCGGCGGTT ATCTGCTCCG GCTTCGGCGG GGTAACCTTA
GGCTCTACGG CTACGGCTAT CGTAAATATG ACGGCGGTAT CTCAACAATA TGGTGCGGCG
CACAGAGCTT TTATCATCGT GCCTTTAGTG TGTGGTTTCT TCATCGATAT CATCAATGCG
ATGATCATTA ATTTGTTTGT AAGCTTTTAG
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| Protein sequence | MEPHILEIKD FVSFTLAIIA LFIGKAIISR YELLRKYSIP EPVVGGFACA AIVGILYYAF
GLQIEFNLDV RDILLLYFFA GIGLKADFAT LLKGGKPLLI LILLSSVFIF LQNFTGVSVA
TLFGLDPKAG LMSGSISLIG GVGTAMAWTP TFVEELGIAN ANELGIASNT LGLISACVIG
GPIAAYLMKR HHIKPNLDEE LDIGASHKSS SNHIQVDYFG VLRAWLWLNV TLIIGYFIDL
AMQEAGLKLP MFVACLLSGI IIGNVGRALL NRKKDRDLTY VEEASRGLSL IQDICLGMFL
TMALMSLKIW ELEGSLFYIS VVMSIQVLLS VLFTVFIVFR AMGKDYEAAV ICSGFGGVTL
GSTATAIVNM TAVSQQYGAA HRAFIIVPLV CGFFIDIINA MIINLFVSF
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