| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1346 |
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| Symbol | |
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| ID | 5611727 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1601225 |
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| End bp | 1601581 |
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| Gene Length | 357 bp |
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| Protein Length | 118 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640932211 |
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| Product | sigma 54 modulation protein/ribosomal protein S30EA |
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| Protein accession | YP_001473085 |
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| Protein GI | 157374485 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1544] Ribosome-associated protein Y (PSrp-1) |
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| TIGRFAM ID | [TIGR00741] ribosomal subunit interface protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0172267 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAA ATCTTTCTGG TCACCACGTC GATGTTACCG ATTCAATCAA AGAGCATGTG
AACGAAAAGT TTTCCAAAAT CGCCACTCAT TTCCCAACGT TAATCTCGTT AGATGTCATC
ATTTCTAAGG AGCATGGCGA GTATCAGGTT GAGCTGCGTA CAAATTATGA AGGTAGCCGA
ATTTCAGCAT CTGGTTGTAA TGGTGTGATG TATCCGGCTA TTGCGACTGC GGCTAAGAAG
CTTGACGCAG CGCTTAAGCA CAGAAAAGGT CAGCTAAAAG CCGACCTTCA TGAGAAGCCT
GTGAGTACGA CTCCCGAGAT AGCTCATGAG ATAGTTCAAG AGATGAAACT TGTCTAA
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| Protein sequence | MKINLSGHHV DVTDSIKEHV NEKFSKIATH FPTLISLDVI ISKEHGEYQV ELRTNYEGSR
ISASGCNGVM YPAIATAAKK LDAALKHRKG QLKADLHEKP VSTTPEIAHE IVQEMKLV
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