| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1340 |
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| Symbol | |
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| ID | 5610929 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1595219 |
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| End bp | 1596106 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932205 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473079 |
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| Protein GI | 157374479 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00430506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCGTT TACATACAGA AGCGGGGGGA GGCCGACTCC AATTTGCCAT CAAGACACTT
GTATCTTGTA CTTTGCTACT CTCCTCTTTC ATGACTCTTG CCGATGAGAG TAAGTTACGG
ATCGCGATAG GAAGCTTTTA TTCGACATCG GATTCGGGAA TGGAGGTGAT CAGTCCCTTA
ACCGATGAGA GCTTTGAGCT GGATTTTGAA TCAGATCTCA AGTTAACTGA AAGTGAATTC
CTCCCATTTT TTGAGGTGGC ATACTGGTTC AATGGCCATC ACGGGGTCTA TCTGGATTGG
AAGCGATTAC ACCGTGATGC CACAAACCTG AATATAACCA CCCCCTTCGA ATATGAGCAC
CCTGAAACCG GGGATAAATA TTTAGTGCAG TCAGGCAGCG TGATCACCAC AACATTTAAT
GTCGATATTG CCCGCATTGG TTATGGCTAT GATTTTTACC GCGATGATGA ATGGGACTTG
ATCCTGACTG CGGGCCTGCA CGTGATGTGG TTTGAACTGG GTTTTTCCGG GGATATCGCG
GCTTGTGTCG ACAATAATTG TGGCTCAGTG GAGCTCGAAC CCGACAACAT AGTATTCACC
GACGCTACGG CCCCTCTGCC CGATATCGGT GTCGTTGTCA ATTATCAGTT TGCTGATGGT
TGGCAACTAG GTACACAGGC TCAATATTTC TATCTGAGTT TAGATAACAT CAGTGGTCGG
TTGGTCGACT TGAGTGCCGG AATTGAGTAT ACCTTCAGGG ATAGTTTTGC CACCGAACTC
TCTTATAAAT ACTATAAAGT ATCGGCGGAT ATTGAGGATG ACAATTCCAC ACTGAAGCTC
CATTATGGCT TTCAAGGACC CATGTTAACG CTCTCCTATA CTTTTTAG
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| Protein sequence | MKRLHTEAGG GRLQFAIKTL VSCTLLLSSF MTLADESKLR IAIGSFYSTS DSGMEVISPL
TDESFELDFE SDLKLTESEF LPFFEVAYWF NGHHGVYLDW KRLHRDATNL NITTPFEYEH
PETGDKYLVQ SGSVITTTFN VDIARIGYGY DFYRDDEWDL ILTAGLHVMW FELGFSGDIA
ACVDNNCGSV ELEPDNIVFT DATAPLPDIG VVVNYQFADG WQLGTQAQYF YLSLDNISGR
LVDLSAGIEY TFRDSFATEL SYKYYKVSAD IEDDNSTLKL HYGFQGPMLT LSYTF
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