| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1337 |
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| Symbol | |
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| ID | 5610322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1590298 |
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| End bp | 1590996 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932202 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473076 |
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| Protein GI | 157374476 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4912] Predicted DNA alkylation repair enzyme |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0135727 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.552323 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAGGCTG GTGAAATAAC CGCTCACTTT TTGGAGCTGG GCGATCCTCA AATAGCCACA
CACTCGCAGC GTTTTTTCAA AACCGACACA GGGGAGTATG GCGCCGGGGA TAAGTTTATC
GGTATCAGGG TACCCGTCAT CCGCGCCCGT GTAAAAGCCC TGCCACCTCT CTCCCTCGAC
ACTATTTCCG AGCTTATTCG CAGTGAATTT CACGAAATCC GTCTATTCGC CACATTGGCC
TTAGTAGACA ACTTTAATAG GGCCGATGAA ACAGACAGAG AGGAGATATA CCATCTCTAC
CTGGAAAATC ATGCATTTAT CAATAATTGG GATATCGTAG ACTGTTCGGC CCATAAAATT
GTCGGTCCCT ACCTGCTCAA TCGCCCGAGG GAGACGCTAT ACAAACTCGC CGGGAATGGC
ACGCTCTGGC AACGTCGCAT TGCGGTTATC AGCTGCTTCA CCTTTATCAG GCATGATGAC
TTTGATGACA TACTCAGGCT CAGTGAAAAG CTACTCTCCG ATCCTGAAGA TCTTATACAT
AAAGCTGTGG GTTGGATGCT TAGAGAGGTA GGGAAACGAG ATAGGGCAAG GTTGGAGGCA
TTTTTAGACC AACATAATAA GCAGATGCCG AGAGTCATGC TCAGATATGC GATAGAGAAG
TTTCCGACTG AGCTTCGCCA CCATTACATG AAAAAGTAA
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| Protein sequence | MEAGEITAHF LELGDPQIAT HSQRFFKTDT GEYGAGDKFI GIRVPVIRAR VKALPPLSLD
TISELIRSEF HEIRLFATLA LVDNFNRADE TDREEIYHLY LENHAFINNW DIVDCSAHKI
VGPYLLNRPR ETLYKLAGNG TLWQRRIAVI SCFTFIRHDD FDDILRLSEK LLSDPEDLIH
KAVGWMLREV GKRDRARLEA FLDQHNKQMP RVMLRYAIEK FPTELRHHYM KK
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