| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1333 |
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| Symbol | |
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| ID | 5610608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1586138 |
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| End bp | 1586647 |
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| Gene Length | 510 bp |
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| Protein Length | 169 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640932198 |
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| Product | phosphoribosylaminoimidazole carboxylase |
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| Protein accession | YP_001473072 |
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| Protein GI | 157374472 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
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| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.195445 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAAAC CATTTGTTGC AGTGTTAATG GGATCTGATT CTGATCTACC CACCATGCAA
GCTACCCTAG ATGTGCTAAA AACATTTGAT ATTCAATTTG AAGCTAAGGT CACATCGGCT
CACCGTACGC CTGCGGCGAC CCATGCATAC GTTACAGATG CTGAAGCGCG TGGCTGTAAG
GTCTTTATCT GTGCAGCTGG CCTCGCGGCC CATTTAGCGG GCGCCGTTGC CGGTATCACT
ACTCGTCCTG TTATCGGCGT GCCTGTCGAT TGTGGTCCAT TGCAGGGCCA TGATGCACTC
TTATCGACAG TCATGATGCC TGGCGGCGTA CCTGTTGCTA CCGTGGCTAT CGGTAGCGCC
GGTGCTAAAA ACGCGGGTTA TTTAGCCGCG CAGATGCTTT CCGTTGGTGA TGATGCATTA
GCGCTTAAGG TTAAAGAGGA GCGTGCTATT TCGGCCGAAG CCGTGCAGGC GAAAGATGCC
AAGCTTCAAG AGAAGCTCGC TAACGTTTGA
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| Protein sequence | MSKPFVAVLM GSDSDLPTMQ ATLDVLKTFD IQFEAKVTSA HRTPAATHAY VTDAEARGCK
VFICAAGLAA HLAGAVAGIT TRPVIGVPVD CGPLQGHDAL LSTVMMPGGV PVATVAIGSA
GAKNAGYLAA QMLSVGDDAL ALKVKEERAI SAEAVQAKDA KLQEKLANV
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