| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1329 |
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| Symbol | |
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| ID | 5610572 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1581345 |
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| End bp | 1582979 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932194 |
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| Product | glutamate--cysteine ligase |
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| Protein accession | YP_001473068 |
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| Protein GI | 157374468 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2918] Gamma-glutamylcysteine synthetase |
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| TIGRFAM ID | [TIGR01434] glutamate--cysteine ligase
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type
[TIGR01552] prevent-host-death family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.423999 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0190825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGATGA AACTAGAGAA AAAAATATTG AACTCTTTCA ATGAACTGAT TGGACATCTC
TCTGATTCTG AGGGGCGTAA TGCACTAAAG GGAATGCAGC GTGGAATTGA ACGCGAAGCA
TTGAGGATCA ATAGCTCTGG ACACCTTGCT ATAGACGGTC ATCCCAAGGT ACTAGGCTCT
GCATTAACTC ACCCAAGGAT CACTACAGAT TACAGTGAAT CTTTGCTTGA GTTTATCACT
CCGGTTTTCA GCGATATAAA CAGTTTACTC GACGATCTGA CCTATACTCA CGCTTTCACC
GTCCAGAATT TAGATAGCCA GCGCCTCTGG CCTGTCAGCA TGCCTTGTTA TGTGGGCGAT
ACGGCAGCGA TTCCTATTGC TGATTATGGC TCCTCAAATG CGGGTCAAAT GAAGCGTTTA
TACCGAAAAG GGTTAACCTA TCGTTATGGC GCTCAAATGC AGATTATTTC CGGTGTGCAT
TTTAATTTTT CTGTTTCAGA TACCTTGTGG GACAAGCTCT ACAATTTAAG TGATACTCAG
GTCTCTAAGA GTGATTTTAT CTCCGAGTCT TATCTGGGGC TCATTCGTAA TTATCGCCAT
ATGGTTTGGG TGTTACCCTA TCTGTTTGGC GCATCTCCGG CCTTGTGCAG CTCATTTATT
AAAGATCAAC AGACTGATAT TGAATTTGAG AAGATGGGTA AGGGGACATT ATACCTGCCT
TACGCCACTT CACTGAGGAT GAGCGATCTC GGCTACACAA ATAAAGAGCA AGAGCAGTTA
GACATCAGCT ATGACTCCCT CGAACAGTAT CTGGAGGGGA TGAACAGTGC GATAAACATG
CCGTCTGCTA ACTTCGAGAA GATAGGCGTT AAGGTCGATG GCGAATTTCG CCAACTGAAT
GCTAACGTAC TCCAGATTGA AAATGAGTTT TACTCGCCTA TCCGTGCTAA ACGTGTGGCT
TTAGATGATG AAAAACCTTC AGAGGCACTC GCGCGGGCCG GTATCGAATA TATCGAAGTC
AGGGCCTTGG ATGTAAACCC ATACAGCCCT GTGGGTATCG ATGCGTCACA GATCCGATTC
CTCGACTTAT TCTTAATGTA TTGTCTGCTA AATGAATCAC CTACATCCGA TTCTGTGCAA
GAAAATGAAA TTTCAAATAA CCTTAATCGC GTGGTTTTAG AAGGTCGCAG GCCTGGCCTT
GAGTTAAGTC GAAATGGTGA GTCTGTCCTG CTCTCAACTT GGATGAGGGA GATGTTCGAT
GAGCTGAAAC CACTTGCGTC GTTACTCGAT AATGAAGGTG AGCATCTCTA TATCGATGCA
CTCGACAGAT GGCAAAGTGC TGTGATCGAC CCTGATTTAA CCATCTCGGG GCAGATCATG
AAAGAGCTTA ATGGCTCCCA GGTCGATCAT GGTTGTTGGG TCAAAAAATT AGCCGAAGAG
TATCATGACA TATTGAGTCG TTACTCCTTG CCAGAGGAGG TGTTGTTGCA ATATCAGCAA
GCAGCGAGCC GCTCCTTAGA GAAACAGACA AAGATAGAAT CAGAGTCGAC TCAAAATTTT
GAAGAGTATT TAGCCGACTA TTTTAACGAT GACAGCGTTT CATTTGAAAC CCCAAAGGTT
GTGAGTTCAG TATGA
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| Protein sequence | MMMKLEKKIL NSFNELIGHL SDSEGRNALK GMQRGIEREA LRINSSGHLA IDGHPKVLGS
ALTHPRITTD YSESLLEFIT PVFSDINSLL DDLTYTHAFT VQNLDSQRLW PVSMPCYVGD
TAAIPIADYG SSNAGQMKRL YRKGLTYRYG AQMQIISGVH FNFSVSDTLW DKLYNLSDTQ
VSKSDFISES YLGLIRNYRH MVWVLPYLFG ASPALCSSFI KDQQTDIEFE KMGKGTLYLP
YATSLRMSDL GYTNKEQEQL DISYDSLEQY LEGMNSAINM PSANFEKIGV KVDGEFRQLN
ANVLQIENEF YSPIRAKRVA LDDEKPSEAL ARAGIEYIEV RALDVNPYSP VGIDASQIRF
LDLFLMYCLL NESPTSDSVQ ENEISNNLNR VVLEGRRPGL ELSRNGESVL LSTWMREMFD
ELKPLASLLD NEGEHLYIDA LDRWQSAVID PDLTISGQIM KELNGSQVDH GCWVKKLAEE
YHDILSRYSL PEEVLLQYQQ AASRSLEKQT KIESESTQNF EEYLADYFND DSVSFETPKV
VSSV
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