| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1314 |
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| Symbol | |
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| ID | 5611303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1559167 |
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| End bp | 1560048 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640932167 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473053 |
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| Protein GI | 157374453 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2110] Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.0000692688 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATTCCTT ACCTCCCAAT AAATAAATAT AGGCAAGCCA TTAAACTTGA CCAAGCTACT
AACATTAAGC CAACTGCCTT TTTGCACCCA GCCATTATTT CAGTGCTTGA GCAACTTAAC
GTTTCTTTTT CTCCTAGTAT TTCACAGCAA AAAGCTTTAG AAAAACTACA CGGGGCCTTA
GCACTGGTGG AGCCCTATCG ACTGCCAACA GATTTAATGA ACGAGATAGA CTCAATTGCA
GCTTGTGTAA ACGCTCAACA ACCGCTTACG GATACAGCAT CATTGCCCTC CATTGATAGT
ACTTATACTA CCTCCTATCC AGCTGCAGGC AACACCAGTA TTTGGGTCGG TGACATTACT
CAACTTAAGG TTGATGCAAT TATTAATGCT GCTAACGTCT ATCTATTAGG CTGCAGACAA
CCCAATCACC GATGTATTGA TAACGTAATC CATTCTGCTG CGGGATCTCG GTTAAGAGAT
GATTGTGCCA CCATTATTGA GCAACAAGGT GGTTTGGAGC CAACGGGGTC AGCCAAAATA
ACCAGAGGCT ATGCACTACC AGCAAAGTAT GTCATCCATA CTGTAGGCCC ATGCTTACAT
TCAGGTTATT TACCTGATGA AGAAGATGAA AAGCAACTAA AAAGTGCTTA TCAAAGTTGT
TTAACCCTAG CTTCTGAAAT TAACGACTTA AAAACACTTG CCTTTTGTGC TATTTCAACA
GGAGTGTTTT CCTACCCCAA AATAGATGCG GCAAGCGTTG CACTTGAAAC AGTTTCTGAC
TGGCTAAGTG AGCACCCACA GCATTTTGAG AAAGTCGTGT TTAACTTGTA TACCCAAGCA
GATGCAGCTA TTTACGAAAG GCTTATTTAT GAATGGACAT GA
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| Protein sequence | MIPYLPINKY RQAIKLDQAT NIKPTAFLHP AIISVLEQLN VSFSPSISQQ KALEKLHGAL
ALVEPYRLPT DLMNEIDSIA ACVNAQQPLT DTASLPSIDS TYTTSYPAAG NTSIWVGDIT
QLKVDAIINA ANVYLLGCRQ PNHRCIDNVI HSAAGSRLRD DCATIIEQQG GLEPTGSAKI
TRGYALPAKY VIHTVGPCLH SGYLPDEEDE KQLKSAYQSC LTLASEINDL KTLAFCAIST
GVFSYPKIDA ASVALETVSD WLSEHPQHFE KVVFNLYTQA DAAIYERLIY EWT
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