| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1308 |
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| Symbol | |
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| ID | 5611316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1554164 |
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| End bp | 1554799 |
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| Gene Length | 636 bp |
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| Protein Length | 211 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932161 |
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| Product | 4Fe-4S ferredoxin iron-sulfur binding domain-containing protein |
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| Protein accession | YP_001473047 |
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| Protein GI | 157374447 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0437] Fe-S-cluster-containing hydrogenase components 1 |
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| TIGRFAM ID | [TIGR02951] DMSO reductase, iron-sulfur subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000516456 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACTAATA ATACCCAATA CGGATTTCAT TACGACGCCA GCAAATGCAA TGGCTGCAAA
GGTTGTCACA TTATTTGCAA AAGTCGTTTT GATGGTGAAG ATGGCGTGAT ACCTCGCCGA
GTTTATGAGT ACGTTGGCGG AGGTTATGCT GACAATAATG ATGGCACTGT GACGAGTAAC
ACCTTTGCTT ATTACACCTC GATTAGTTGT AATCATTGTA GCGAGCCAGT ATGTGTCAAG
GCCTGTCCAA CGGGCGCAAT GCATAAAAGG AGTAAAGATG GACTAGTTCA TGTTTCTTCG
GATTTGTGCA TTGGCTGTAG TAGTTGCGCC AAGGCGTGTC CCTATGATGC ACCTCAACTC
GATCCTGTTA AAAAGGTCAT GGTTAAATGC GATGGCTGCT TTGAACTTAT AGCAGAAGGC
CGCAAACCTT TGTGTGTAGA AGGCTGCCCT CAGCGTGCGT TAGATTTTGG CCTTATTGAG
GATTTAAAAG CCAAATATCC AGGAAGCAGT ATTGCTAATG TGGCACCGTT GCCACAAGCC
AGCATTACCA GTCCTAACTT GTTGATCAGC ACCAACCGCT TATCTCGTCC TAGCGGTTCA
AGTGAAGGTA AAATAGAGAA TTTGACTGAG GTCTAA
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| Protein sequence | MTNNTQYGFH YDASKCNGCK GCHIICKSRF DGEDGVIPRR VYEYVGGGYA DNNDGTVTSN
TFAYYTSISC NHCSEPVCVK ACPTGAMHKR SKDGLVHVSS DLCIGCSSCA KACPYDAPQL
DPVKKVMVKC DGCFELIAEG RKPLCVEGCP QRALDFGLIE DLKAKYPGSS IANVAPLPQA
SITSPNLLIS TNRLSRPSGS SEGKIENLTE V
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