| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1295 |
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| Symbol | surE |
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| ID | 5613564 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1537737 |
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| End bp | 1538486 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640932148 |
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| Product | stationary phase survival protein SurE |
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| Protein accession | YP_001473034 |
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| Protein GI | 157374434 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0496] Predicted acid phosphatase |
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| TIGRFAM ID | [TIGR00087] 5'/3'-nucleotidase SurE |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.789005 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000153461 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGATAAAGA TCCTAGTAAG TAATGATGAT GGTGTTACGG CGCCGGGCAT AAAGGCACTT
TCAGATGCTC TATCCACTTC TTATCAGGTG ATGACGGTTG GCCCTGACAG AAACTGTTCG
GGGGCGAGTA ACTCTTTAAC CTTGACGAAC CCTCTACGTA TCAATACCTT GAGCAATGGG
TATGTCTCGG TGAGCGGAAC GCCAACTGAC TGTGTACACC TTGCCATTCG TGAACTATAC
ACTGATGAGC CCGATATGGT GGTATCCGGC ATCAATGCCG GGGCAAACTT AGGTGATGAC
ACCTTGTACT CAGGCACCGT TGCTGCGGCG ATGGAAGGGC GGTTTCTCGG CTTACCCGCA
ATTGCCATCT CATTGGTTGG CTCAACGCTT ACTCACTACG AAACTGCGGC TCATTTCGCC
TGTAAGGTGA TAGCCGGATT GTTGAAGAAA CCGATCGCAC AAGATCAAAT TTTAAATATT
AATGTACCCG ATCTTCCCAT CGAACAGGTG AAGGGGATCA GGGTGACGCG CCTGGGGGCA
AGGCATAAAG CCGAAGGTAT GATACGTACT CAAGACCCCG CCGGGCGTGA TATTTTTTGG
TTGGGTCCGC CCGGTGATGA GCAAGATGCC AGTGATGGCA CCGACTTTCA TGCCGTGACT
AATGGCTATG TGTCTGTAAC GCCATTGACG GTTGACTTGA CAGCTTTTGA ACAGATCTCA
ACAATGCAAC AATGGATAGA TAAGATATGA
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| Protein sequence | MIKILVSNDD GVTAPGIKAL SDALSTSYQV MTVGPDRNCS GASNSLTLTN PLRINTLSNG
YVSVSGTPTD CVHLAIRELY TDEPDMVVSG INAGANLGDD TLYSGTVAAA MEGRFLGLPA
IAISLVGSTL THYETAAHFA CKVIAGLLKK PIAQDQILNI NVPDLPIEQV KGIRVTRLGA
RHKAEGMIRT QDPAGRDIFW LGPPGDEQDA SDGTDFHAVT NGYVSVTPLT VDLTAFEQIS
TMQQWIDKI
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