| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1289 |
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| Symbol | pyrG |
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| ID | 5611143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1531660 |
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| End bp | 1533297 |
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| Gene Length | 1638 bp |
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| Protein Length | 545 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932142 |
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| Product | CTP synthetase |
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| Protein accession | YP_001473028 |
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| Protein GI | 157374428 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0504] CTP synthase (UTP-ammonia lyase) |
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| TIGRFAM ID | [TIGR00337] CTP synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.934915 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000000280114 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAACAA GGTATATCTT CGTTACTGGT GGCGTGGTTT CATCACTAGG TAAAGGCATT
GCAGCAGCAT CTTTAGCAGC AATTTTAGAG GCCCGTGGCC TTAATGTAAC TATGATGAAG
CTGGATCCTT ATATCAATGT AGATCCGGGT ACTATGAGCC CGACGCAGCA TGGTGAAGTG
TTTGTTACAG AGGATGGCGC TGAAACCGAT CTCGATTTAG GTCACTATGA GCGTTTTATT
CGTACCAAGA TGAATCGTCG TAATAACTTC ACTACCGGTC GTATCTATGA AGAGGTACTT
CGTAAAGAGC GTCGTGGTGA TTACTTAGGT GCGACTATTC AGATCATTCC TCATATTACC
AATGCGATCA AAGAGAAAGT GCTTGCGGGC GGCGAAGGGC ATGATGTTGC TATCGTCGAG
ATTGGCGGAA CCGTTGGTGA TATTGAATCT CTTCCATTCT TGGAATCTAT TCGTCAGTTA
AGTGTTGAGT TAGGGCGTGA ACGTTCACTC TTTATGCATT TGACTCTGGT GCCATTCCTT
GGCGCTGCTG GTGAAGTGAA GACTAAACCG ACACAACATT CAGTGAAAGA GCTTCGCTCC
ATCGGTATTG CACCGGATGT ACTGGTTTGT CGTGGTGACC GTCCTGTTCC AGCGAATGAA
AAAGCAAAAA TTTCTCTCTT CTGTAATGTA GAAGAGCGTG CTGTTATCTC GCTTAAAGAC
GTAGATAGTA TCTATAAGAT CCCTGCACTA CTTAAGGCGC AAGGTTTAGA TGAACTCGTG
GTTAAACGTT TTGGTATTAC TTGTCCTGAA GCCGATCTGC ATGAGTGGGA ACAGGTGATT
TATCAAGAAG CTAACCCAAC GGGTGAAGTG ACTATCGGTA TGGTCGGTAA GTACATTGAA
CTCCCCGATG CTTATAAGTC TGTAAATGAA GCGTTGAAAC ACGCCGGTCT TTTTAATCGC
GTTTCAGTGA ACATCAAGTA TATCGATTCA CAAACGGTTG AAGCTAAAGG CGAAGAGGTA
CTTCAGGGCT TAGATGGTAT CTTAGTTCCG GGTGGATTCG GAGAGCGTGG CGTAGAAGGT
AAGATCCTTG CGGCTAAATA TGCCCGTGAG AATAACCTTC CTTATTTTGG TATCTGTTTA
GGTCTGCAAG TTGCTTTAAT TGAATTTGCA CGTCACGTTG CAGGTCTAGA AGGCGCTCAT
TCAACAGAAT TTAACAAAGA AACGCCGCAT CCAGTGGTTG GTTTAATCAC CGAGTGGATC
AATGAAGAGG GTAATGTTGA GCAACGCCAT GAAACATCAG ATCTTGGTGG GACAATGCGT
CTAGGCGCTC AGCTTTGTCA TCTTTCTGAA GGTTCTAAAG CGGCGATTTC TTATGATGGT
AATACTTGTG TAGAACGTCA CCGTCATCGC TATGAAGTCA ACAACAACTA TAAAGATCGT
CTTGAAAAAG CAGGCTTAGT ATTTAGTGGT CTCTCTTCCG ACCGCCAGCT AGTTGAGATG
ATTGAACTGC CAAACCATCC ATGGTTTGTG GCAGGTCAAT TCCATCCGGA ATTTACATCA
ACACCTCGTG ATGGTCAGCC ATTATTCGTA GGATTTGTTG CTGCAGCCAC CGCGTATCAG
AAACGCGATT TAGGCTAA
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| Protein sequence | MTTRYIFVTG GVVSSLGKGI AAASLAAILE ARGLNVTMMK LDPYINVDPG TMSPTQHGEV
FVTEDGAETD LDLGHYERFI RTKMNRRNNF TTGRIYEEVL RKERRGDYLG ATIQIIPHIT
NAIKEKVLAG GEGHDVAIVE IGGTVGDIES LPFLESIRQL SVELGRERSL FMHLTLVPFL
GAAGEVKTKP TQHSVKELRS IGIAPDVLVC RGDRPVPANE KAKISLFCNV EERAVISLKD
VDSIYKIPAL LKAQGLDELV VKRFGITCPE ADLHEWEQVI YQEANPTGEV TIGMVGKYIE
LPDAYKSVNE ALKHAGLFNR VSVNIKYIDS QTVEAKGEEV LQGLDGILVP GGFGERGVEG
KILAAKYARE NNLPYFGICL GLQVALIEFA RHVAGLEGAH STEFNKETPH PVVGLITEWI
NEEGNVEQRH ETSDLGGTMR LGAQLCHLSE GSKAAISYDG NTCVERHRHR YEVNNNYKDR
LEKAGLVFSG LSSDRQLVEM IELPNHPWFV AGQFHPEFTS TPRDGQPLFV GFVAAATAYQ
KRDLG
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