| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1284 |
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| Symbol | |
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| ID | 5611111 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1523399 |
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| End bp | 1524004 |
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| Gene Length | 606 bp |
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| Protein Length | 201 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640932137 |
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| Product | hypothetical protein |
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| Protein accession | YP_001473023 |
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| Protein GI | 157374423 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3068] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000586113 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGACAATCA AACCAGGCTT CTTTAAGCGC GTAAAAGCAT TAGATTTCCA ACAGAAAAAA
GTATTTGCTG TTGCCTTATG CCAACGCATG CTTCCCAATT ATCAGTTGTT TTCTCAAGTT
TGTGAATTTG GCGATCCTCA GATTTTAGAC ACTGTCTTAA ACTTGCTATG GCAATCTTGC
TATGATCAAA AACTCAAACT GAACATCGAT ATCTACCTGG AAAGATTAGA GCTTAACACG
CCAGATGCTG CAGACTTCGA TGTCTACGGA GTCTATCCGG CTATGGATGC TTCTACAGCA
CTCATCTCAC TTCTCAGTGC AATTCAGGGG AAAGTCGAAG AGGATATTGT CAATATCAGT
AAGCTTTCGT CGAGCACAGT AGCAAACTAT ATTGAAGCGA TTTCTGATGT AGAGATGGAC
GAAGAAGCTT TCGATGACTA CATTTTTAAT CATGAAGTCA TGGTCGAAGA GAAGACTCTT
CAGGACTCTC TACTGCAACT TATCGAAGAC AGCCCAAAAT TGGATGCGGG GTTTATCAAG
GCATTACGTA AGGAGATCAT CGAGGCAGGC GTGTCGAATA TCGGCATAGC AACACCGGAA
GTTTAG
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| Protein sequence | MTIKPGFFKR VKALDFQQKK VFAVALCQRM LPNYQLFSQV CEFGDPQILD TVLNLLWQSC
YDQKLKLNID IYLERLELNT PDAADFDVYG VYPAMDASTA LISLLSAIQG KVEEDIVNIS
KLSSSTVANY IEAISDVEMD EEAFDDYIFN HEVMVEEKTL QDSLLQLIED SPKLDAGFIK
ALRKEIIEAG VSNIGIATPE V
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