| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1280 |
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| Symbol | |
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| ID | 5613732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1518661 |
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| End bp | 1519869 |
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| Gene Length | 1209 bp |
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| Protein Length | 402 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932133 |
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| Product | ubiquinone/menaquinone biosynthesis methylase-like protein |
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| Protein accession | YP_001473019 |
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| Protein GI | 157374419 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.280031 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000741696 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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Sequence |
| Gene sequence | GTGGATCAAA CGACCAGCAA AGTAAAGAAT ATGTATGAGC AATATCCCTA CCCGTCAGGC
GACCCGACCA TTAGGGCGGG ATTTGATATC AGATTACTCT TGAGCTATGT CGCAAAGAAA
AGAGGGACGG ACAGGCCTCT TCAGGTTTTA GATGCAGGAT GTGGGCGTGG TCCTGGTGTC
CTTGGCGCCG CTTCGCTTCA ACCCAATGTG ATGTTTACCG CTATCGACAT CAACAGTGTT
GGTTTAGCCG AAGCACGAGC CAATGCTCAG GCTCGTGGGC TCACCAATAT TAACTTCGTG
CAAGCCGATC TTATGACCTT AGAGGGGGTG GAAGTACCTC CAGGTGGTTT CGATGTCATC
TACTCTTCGG GAGTATTGCA TCACTTAGCC GATCCTCAAA TGGGCCTCAA TAACCTGACT
TCAATTCTTG CTCCCCATGG TGTGATCTCT TTAATGCTCT ATGGCAGTTA TGGACGACAA
GCCCTATATA GACTCATTGA AGGGATAGAT ATCCTCTCTT CTAATGAAGA TGCCATAGAG
AGCCGCTTAC CACTGGCTAG AGCATTGACT GAGGTGGCTG ATACTAGCAT TTTTAAGGGT
AATTATTGGC AAGGCACCTA CAGAAACCCT GATGTCGAGT TTGTCGATAC CTGCTTGAAT
GTAAACGAGA TTAGTTATGA TATAACCTCG TTATGGCAGT TTATAGATAA TGCTGGAATG
AAGTTTATTC GTTGGACCGA CCCCGATGCC TGGTCTGTGG ATAAACGTTT TAAAGATCCT
CAACTGTTAG CCAGGTTAAA GGAGTTGAGT CTGACTGAGC AGTATAGGGT GATTGAAAGG
TTGTTCGAAA TGCCCAAGTT GGAGTTCATC ATATGTAAAG CCGATAATTA TGCGGCACCG
GTGGTTACAA TAGATGAGAT TGAATCGAGT CAATTTGCCG TGAATCCGGA AGCCTCATTT
TCTGTAGAAA AGCGGAACTT AGATCATTCC CAACGAATTG AGGGCGTCAG CTTTAAGGTG
AGAAACAGGA AAAGTCAAAC GGTAACGGAT CCGACTCTGG CTCAAGTCAT GCTACTGCTT
ACCGAACAAA CCACCTGTTT CACCGGTGGT GAGATGATTA ATGTACTAGG TCAGAATGGT
GCAGATAAAA ACTCGGCTAT TGGGGTGATT TACGAATTAC TTGAGAAAGA GATTATTTTT
ATCCCTTAA
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| Protein sequence | MDQTTSKVKN MYEQYPYPSG DPTIRAGFDI RLLLSYVAKK RGTDRPLQVL DAGCGRGPGV
LGAASLQPNV MFTAIDINSV GLAEARANAQ ARGLTNINFV QADLMTLEGV EVPPGGFDVI
YSSGVLHHLA DPQMGLNNLT SILAPHGVIS LMLYGSYGRQ ALYRLIEGID ILSSNEDAIE
SRLPLARALT EVADTSIFKG NYWQGTYRNP DVEFVDTCLN VNEISYDITS LWQFIDNAGM
KFIRWTDPDA WSVDKRFKDP QLLARLKELS LTEQYRVIER LFEMPKLEFI ICKADNYAAP
VVTIDEIESS QFAVNPEASF SVEKRNLDHS QRIEGVSFKV RNRKSQTVTD PTLAQVMLLL
TEQTTCFTGG EMINVLGQNG ADKNSAIGVI YELLEKEIIF IP
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