| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1276 |
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| Symbol | ribH |
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| ID | 5611100 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1515812 |
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| End bp | 1516294 |
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| Gene Length | 483 bp |
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| Protein Length | 160 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932129 |
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| Product | 6,7-dimethyl-8-ribityllumazine synthase |
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| Protein accession | YP_001473015 |
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| Protein GI | 157374415 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0054] Riboflavin synthase beta-chain |
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| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.0000000153219 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.0000000000568177 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGAACGTAG TTCAAGGTAA TATCGAGTCG AAAAACGCCA AGATCGCTAT CGTAGTTTCA
CGCTTCAATA GCTTCCTTGT TGAGAGCCTA CTTGAAGGTG CGGTTGATAC GCTTAAACGT
TTCGGTCAAG TCTCTGATGA AAATATCACA GTAGTACGTG TTCCTGGAGC GGTTGAGTTA
CCACTTGCAG CGCGTCGTGT TGCTGCCAGC GGTAAATTTG ATGGGATTAT TGCACTGGGT
GCAGTTATCC GTGGTGGTAC GCCACATTTT GATTTTGTTG CAGGTGAGTG TAACAAAGGT
TTAGCTCAAG TCGCACTTGA GTTCGATCTT CCTGTTTCAT TCGGTGTGTT AACTACCGAT
ACCATAGAGC AAGCCATTGA GCGCTCTGGT ACTAAAGCGG GTAATAAGGG TGGCGAAGCT
GCACTTGGCC TGCTTGAAAT GGTTAATGTA CTGCAAGAAC TAGAACAGCA GTTGCAAGAT
TAG
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| Protein sequence | MNVVQGNIES KNAKIAIVVS RFNSFLVESL LEGAVDTLKR FGQVSDENIT VVRVPGAVEL
PLAARRVAAS GKFDGIIALG AVIRGGTPHF DFVAGECNKG LAQVALEFDL PVSFGVLTTD
TIEQAIERSG TKAGNKGGEA ALGLLEMVNV LQELEQQLQD
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