| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1260 |
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| Symbol | |
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| ID | 5613901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1496104 |
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| End bp | 1496583 |
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| Gene Length | 480 bp |
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| Protein Length | 159 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932113 |
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| Product | YbaK/prolyl-tRNA synthetase associated region |
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| Protein accession | YP_001472999 |
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| Protein GI | 157374399 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2606] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.0160426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATTT CGACACGTTT GAATGATTAT CTTAGCGATA ACGAGGTCAA CTATAACCTC
GTGGCTCATC CCCATAGCTT TAACTCTCTG AGTTCTGCGA TTGCCGCTCA TATCTCTCCG
GCACAAGTGG CGAAAGCCGT AATTCTGGAA GACCATGAGG GACGAAAAAT GATGGCTGTC
CTCCCAGCCG ATCATAAGAT CAACTTAGGG GCACTCAGCG AAAAACTTAA TCGAGATTTC
CACCTGATAA AAGAGCAAGC CGTCTATCGG ATGTTCAATG ACTGTGAACA TGGCGCGATA
CCACCTATCG GTGATGTCTA CAATATGGAC GCCGTTTACG ATGATCTACT AGTGGAGTCT
AATGAGCTGT ATTTGGAGGC GGGTGATCAC AGTAGCTTTA TCCATATGGA GCGGAAAGAT
TTCGTTCGAC TGATCAAAGA TGCCAAACAT CTTAGATTCA GCCATCAAAC CATCCATTAG
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| Protein sequence | MTISTRLNDY LSDNEVNYNL VAHPHSFNSL SSAIAAHISP AQVAKAVILE DHEGRKMMAV
LPADHKINLG ALSEKLNRDF HLIKEQAVYR MFNDCEHGAI PPIGDVYNMD AVYDDLLVES
NELYLEAGDH SSFIHMERKD FVRLIKDAKH LRFSHQTIH
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