| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1251 |
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| Symbol | |
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| ID | 5610485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1483782 |
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| End bp | 1484150 |
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| Gene Length | 369 bp |
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| Protein Length | 122 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 640932104 |
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| Product | thioesterase superfamily protein |
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| Protein accession | YP_001472990 |
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| Protein GI | 157374390 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1607] Acyl-CoA hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.757255 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAATATT ATAGCCGAAG GTTTATTAAA CCTGAGCATT TGAATCCCGC CAATGCACTT
TTTGGTGGTC AACTTTTGAG TTGGATCGAT GAGGAGGCGG CTATCTTTGC TGGTTGTCAG
ATGAAGAGTG TAAGTATCGT CACTAAGCTT ATCTCTGAAA TTAACTTTAT GGCACCTGCT
AGGCAGGGAG ATGTCATCGA GTTTGGTCTG GAGTTAATCA GTGCCGGTAG CACCTCTATT
GTGGTTCGAT GTGAAGTGAG AAATAAGATG ACCCATCTTC CTGTGGTTTG TATCAACAAG
ATGGTGTTTG TGAATGTCGA TGAGAAAGGT GTGCCATTGG CACATGGAAT ACGAGCGTGT
GCCGCCTAA
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| Protein sequence | MKYYSRRFIK PEHLNPANAL FGGQLLSWID EEAAIFAGCQ MKSVSIVTKL ISEINFMAPA
RQGDVIEFGL ELISAGSTSI VVRCEVRNKM THLPVVCINK MVFVNVDEKG VPLAHGIRAC
AA
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