| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1250 |
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| Symbol | |
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| ID | 5610484 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1481940 |
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| End bp | 1483430 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640932103 |
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| Product | alkaline phosphatase |
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| Protein accession | YP_001472989 |
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| Protein GI | 157374389 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1785] Alkaline phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.895246 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACTG TAGCTGCGCT CGTTTCATGC AGTTTATTGA CTATGGCGGC CAATGCAGCC
CTGTTACCAT CGACGCAAAC TGACAGCGAA TGGTTTAAAG CCAGCGCGCT TAAGGTCGCG
GAAAAAACTG AACAACAGAC TAAAGAGAAG GCTAAAAACG TTATTCTTTT TGTTGGTGAT
GGCATGGGGA TCTCAACCCT GACGGCCGCC CGGATCTATC AGGGGCAACA AGTCCAAGGC
AATAAAGGTG GTGAAGAGAA CTTTCTCAGC TTCGAGAACT TTCCAAATAC GGCATTAGTT
AAAACCTATA ACACCAATCA GCAGACTCCT GACTCTGCCG GCACCATGAC AGCGATAGCC
ACAGGCGTTA AGTCTAAGGC GGGCGTATTA TCTGTCTCTG ATACCAGTTT ACGCGGTAAC
TGCTTGTCAT CTAGAGGGAA TGAACTTGTC ACTCTCGTCG ACCTTGCGAA TGCGAAAGGA
CTATCAACAG GTGTTGTTAG TACCGCACGT ATTACCCATG CTACCCCGGC AGCCACCTAC
TCAAATACCC CGGAACGTAA CTGGGAAGCT GACAGCAACC TACCAACTGA AGCCGTTGCA
AATGAGTGCC AAGATATCGC ATACCAGCTT GTGATGCGTG ATGAAGCCAA TGCGCTTTCT
GTGGCACTCG GCGGCGGCCG TCGTAACTTC ATCCCGGATA CGGTTACAGA TGGTGAAGAT
AAGTCGGGTC GTCGAGCCGA TGGCGTAGAC CTGACTAAAG TCTGGACCGA AAACTTCACA
AATTCCGCTT ATGTATGGAA TAAAGCCGGG TTCGATGCCA TAGACACAGA ATCAACGGAT
CACCTGCTGG GCTTGTTCAA CTCCTCGCAC ATGGAGTATG AGGCAGACAG AGCCGATGAT
ACAGGCGGTG AGCCCTCGCT CACACAGATG ACTACTAAGT CTATCGACAT TCTAAAGAAG
AATGAGCAGG GCTATCTGTT AATTGTTGAA TCGGGGCGAA TAGACCACGC CCACCACGCA
GGTAACGCAA GCCGTGCACT GGCTGACACC GTTGAGCTTT CAAACGCGGT GCAGGCCGCA
CTCGACAATA CCGATCCTGA AGAGACCTTA ATCATGGTTA CCGCGGATCA TAGTCACGTA
TTCACTATTG CCGGTTACCC GAAACGCGGA AACCCTATCT TAGGCTTAGT TCACAATGTC
GATGGCAATC TGGCGAGCGC CGATGATGGC AAACCATACA CCACATTAGG TTACACCAAT
GGTCCCGGCG CCGTCATAGG GCTGCGTGAT GATCTAACAT CGGTCGACAC TCAAGATAAA
GATTTTATGC AACAGGCTCT TATTCCGATG GGAAGTGAAA CTCATGCGGG TGAAGATATC
AGCTTACATG CCACAGGCCC GGGCTCACAT CTGGCCCAGG GCGTTATCGA GCAAAATGTT
ATTTTCCATA TCATCAATCA GGCCCAATCC CTTGACGGCA CGAAATATTA G
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| Protein sequence | MKTVAALVSC SLLTMAANAA LLPSTQTDSE WFKASALKVA EKTEQQTKEK AKNVILFVGD
GMGISTLTAA RIYQGQQVQG NKGGEENFLS FENFPNTALV KTYNTNQQTP DSAGTMTAIA
TGVKSKAGVL SVSDTSLRGN CLSSRGNELV TLVDLANAKG LSTGVVSTAR ITHATPAATY
SNTPERNWEA DSNLPTEAVA NECQDIAYQL VMRDEANALS VALGGGRRNF IPDTVTDGED
KSGRRADGVD LTKVWTENFT NSAYVWNKAG FDAIDTESTD HLLGLFNSSH MEYEADRADD
TGGEPSLTQM TTKSIDILKK NEQGYLLIVE SGRIDHAHHA GNASRALADT VELSNAVQAA
LDNTDPEETL IMVTADHSHV FTIAGYPKRG NPILGLVHNV DGNLASADDG KPYTTLGYTN
GPGAVIGLRD DLTSVDTQDK DFMQQALIPM GSETHAGEDI SLHATGPGSH LAQGVIEQNV
IFHIINQAQS LDGTKY
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