| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1249 |
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| Symbol | |
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| ID | 5609789 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1480291 |
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| End bp | 1481922 |
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| Gene Length | 1632 bp |
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| Protein Length | 543 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640932102 |
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| Product | alkaline phosphatase |
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| Protein accession | YP_001472988 |
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| Protein GI | 157374388 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1785] Alkaline phosphatase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.837433 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.877858 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAAGA AAATACTCGT ACTGTCTACG GCAGCCATAT TAGGTCTGGC GGCATGTGGA
AGCGACGGTG ACAATGGCGC AAACGGCAAC GATGGTAACA ATGGCAGCGA TGGGAGTAAC
GGCAGTGACG GTAAAGACTG GACAACCGTA AATGAGTGGT ATATCGATGG ACAGCGCCGT
GTAACCAAAG CCGCCGACAC CCTAGTAAAC AACCAGGCCG GCGCAGCGAA GAACATTATA
TTGTTCGTTG GTGATGGCAT GGGGATATCC ACAGTTACCG CCGCGCGTAT TCTTGAAGGG
CAGTTAAAAG GAGATACGGG GGAGGAAAAC TCACTCTCTT TTGAAACCCT TCCCCATGTC
GGCCTGGCTA AGACTTACAA TGTCGATGGC CAAACGCCGG ATTCTGCGGG CACCATGACG
GCTATGGTCA CAGGCGTTAA AACCGATGTA GGTGTGATAT CTCAGGCCGA GGGAGTCACT
CGTGGCAATT GCGCTTCGAC CTCAGGGCAG AACCTGATGA CCTCACTCGA ACTCGCTTCA
ATAGCTGGCT TATCGACAGG GGTTGTCTCT ACCGCCAGAA TCACCCACGC GACCCCCGCC
GCGACCTACG CTCACTCACC CGAGCGTAAC TGGGAGAGTG ATGCCGACCT GCCGGCAGAA
GCGGTAACAA ACGGCTGTAA AGATATTGCC GCTCAACTAT TAGACTATAG CTATGGCACT
GGAGTGAATG TGGTCATGGG TGGAGGTCGA CGCGCCTTTA TTCCTAATAC CGTTATCGAT
GGCGAAGGTA AAACTGGTAA ACGTAAAGAT GGACGAGACC TCACCGCAGA ATGGACGGCA
AAATACACCA ATGCAGCCTA CGTCGAAGAC AGAGACAGCT TTCTAGCATT AGACCCAACA
ACAACCGACC ATGCCCTTGG CCTGTTCAAC TCATCCCACA TGGAGTATGA CTACGACCGG
ACGACACAAG GGGTAACGGG TGAACCGTCA CTGGCCGAGA TGACGGCTAA AACCATCGAC
ATTCTCAAGA AGAATGATAA AGGCTTTGTG CTTATTATCG AAGCCGGTCG AATCGATCAT
GCGCATCATG CTGGTAATGC AGCCAGAGCC CTTCACGATA CCATTGCACT GTCTGAAGCT
GTTCGTGTCG CGATGGAGAA GACCTCCTCT AAAGACACCC TGCTTATGGT CACCGCCGAT
CACAGCCATG TATTTACCAT TGCGGGCTAT CCAACCCGTG GTAACCCGAT ACTCGGACTG
GTTAAAGGCA ACGACTCAGC CGGAGCGCCG GTAGTTACCA ACTCGACGGA CGCTAACGGT
CTGCCCTACA CCACCCTTGG ATATACCAAT GGACGCGGGT TTGCAGATCT GAATACTGGT
GGCGATGAGC GTTATGGTTA CCCTATCCAG GCGGGTCGAG TCGACCTGAA CTATGTCGAC
ACGCTTAATG CCGGTTTCCA TCAAGAGGCG CTCATTCCAT TAGAGAGTGA AACTCACGCC
GGTGAAGATG TCGGGATATT CGCCAGTGGC CCGGGTGCAC ATCTGATACA GGGAACGGTA
GAGCAAAACC ATCTCTTCCA TGTGATGAAT CACGCTGCAA ACCTGGTGGT AAAAGCACAA
GCGACCCAGT AA
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| Protein sequence | MNKKILVLST AAILGLAACG SDGDNGANGN DGNNGSDGSN GSDGKDWTTV NEWYIDGQRR
VTKAADTLVN NQAGAAKNII LFVGDGMGIS TVTAARILEG QLKGDTGEEN SLSFETLPHV
GLAKTYNVDG QTPDSAGTMT AMVTGVKTDV GVISQAEGVT RGNCASTSGQ NLMTSLELAS
IAGLSTGVVS TARITHATPA ATYAHSPERN WESDADLPAE AVTNGCKDIA AQLLDYSYGT
GVNVVMGGGR RAFIPNTVID GEGKTGKRKD GRDLTAEWTA KYTNAAYVED RDSFLALDPT
TTDHALGLFN SSHMEYDYDR TTQGVTGEPS LAEMTAKTID ILKKNDKGFV LIIEAGRIDH
AHHAGNAARA LHDTIALSEA VRVAMEKTSS KDTLLMVTAD HSHVFTIAGY PTRGNPILGL
VKGNDSAGAP VVTNSTDANG LPYTTLGYTN GRGFADLNTG GDERYGYPIQ AGRVDLNYVD
TLNAGFHQEA LIPLESETHA GEDVGIFASG PGAHLIQGTV EQNHLFHVMN HAANLVVKAQ
ATQ
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