| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1248 |
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| Symbol | |
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| ID | 5609788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1479386 |
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| End bp | 1480162 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640932101 |
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| Product | hypothetical protein |
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| Protein accession | YP_001472987 |
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| Protein GI | 157374387 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0534452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.591424 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGTACA CTTTACTTAG CGCTGCGATA TTGTTTTCGA TTAGCCTCCC CTCTCTTGCC
CATTCAGCAA CGGAGGCTCA AGAGCTACAA CAAACGCCGG CGTCTTCATT TGAGTGCGAA
GGTTTAACCT CTGACAACAT AGATGCCCGA TATGCCGTTT TTAGTGACCA ATCTCAATCG
GGAGATGAGG TGAGCGATAG GGATATTCGA CTCATTAAAA GCCAGAACAG AGTGATCTAC
AAAAAATCCC CCATAGCGTT TGAGGCCTGG GATAGAAATG GCGAATATGT ACGTTATTTT
CCACAGGAGC AGCGCTCAAT CACTTATCGG CCAAGCGACC TCCGCTCTCT CAATATGACC
TATGACCTTG AGCAACTATT CCACTTAGTA TCGCCTAAGC TCAAATCACA ACTAGAGCCG
ACTGAGAGTA TCGGGCGTTC ATGTTTTACA GTGAATAAAT ACCGAGGCAA ACAAGATGGA
CAAGAGATAG AGCTGGAGTG GATAGCATCA CTTTCGCTCC CCTATCTACT TACCTTAGGG
CAAGGCCAGC AACGGATAAC CTATCGCTTA ATCTCCGCTA ACAACATCAG CAAGAACGAA
TTCGATGCCC TCACCAGAGA TTATAATGAT CTGGATTTCG CCGATGTCGG CGATAGTGAA
TCAGACCCTT TTATCGCTAA GATGATAACT CAGGGATTTA TCCAACATGG TAATTCAGGT
TTTTATGACA GTAATGGCAA TCGGCTATCT GATGGTCATG GCAGTCATGC TCACTAA
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| Protein sequence | MKYTLLSAAI LFSISLPSLA HSATEAQELQ QTPASSFECE GLTSDNIDAR YAVFSDQSQS
GDEVSDRDIR LIKSQNRVIY KKSPIAFEAW DRNGEYVRYF PQEQRSITYR PSDLRSLNMT
YDLEQLFHLV SPKLKSQLEP TESIGRSCFT VNKYRGKQDG QEIELEWIAS LSLPYLLTLG
QGQQRITYRL ISANNISKNE FDALTRDYND LDFADVGDSE SDPFIAKMIT QGFIQHGNSG
FYDSNGNRLS DGHGSHAH
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