| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1211 |
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| Symbol | |
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| ID | 5614018 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1441694 |
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| End bp | 1444360 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640932060 |
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| Product | Beta-N-acetylhexosaminidase |
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| Protein accession | YP_001472950 |
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| Protein GI | 157374350 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3525] N-acetyl-beta-hexosaminidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000482778 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAGGA AAATGATGAA GTTTAAACTT ATCGCTGCAG CAATAACTTT AGTTCTGAGC
ACTGGCGCGT GTAGCCAGAA GGTAACCAGT CCCACAGAAG CCAAGATACT GATAGACCAG
AGTATTACTC AGTCAGCACT CAATCGACTC GGTGACACTT TAGATATTAA GTATCGCTTA
ATCACTAACT ATCCCGATGG CTGCCCAACT TCTGGTGTAG ATGGACGCTG CTTCAGCGCT
CAAATCGATC TCACTTCCTC TGTCGATATC GCGAGTAAAG ACTGGGCAAT ATACTTTAGC
CAGATGAGAC CCGTTAAGTC GGTGAATAGT GATGAGTTTA CCATTACCAG AGTTAAGGGC
GATCTTCACA AAATTGAGCC GACAGCTTCT TTCAAAGGAC TTAAGAAAGG GATTACTAAG
ACCATAGATT TTCGTGGTGA GCTTTGGCAG TTATCAGAAA CGGATGCGAT GCCAAATTAC
TACCTTGTAT CGGGTGAGCT AAAGCCGGTA GTGATAAAAA GCACTCAAGT CACCAAGGAT
GCTGAGACCG GGATGGAACT CAGGCCATAT AATGTCGCGT TTACCGATGC AGACACACAA
TATAAGCGAA GCGATACAGA TAAGCTGAAG TGGGCGACAC CTGAGGTTCT GTTTCTGGAT
AATCAAGGTG TAGACACACA GCCTGAATCG GCTGTGAACA CAATTATACC TACTCCGTTA
AGCGTTGAAG TAACATCGAG CGATAGACCT GTTTCTCTCG CTCAAGGCAT AAAGTTAAAC
CTAAACTCAA TCGATGCTGG CGCAATTACA GCTGCACTGG AGCGACTCGA GCGTATCGGT
GTGGGCCAGA GTGAAAACGG TTTAGTGGTC AACTTTAAAA AAGTAACCGA CGGGCAGGCA
AGCGGAAGTT ACCGCTTAAA TATCGCAGAA AACAATATCA CAATATCAGC AGGCGATGAT
GCCGGTTTCT CCTATGCGTT GGCTTCTTTG ACCAGCCTGA TAGACACAAA CAAGCTATCT
GTTAATACCA TGAGTATTCA AGACCACCCC AGATATGGAT TTCGTGGTAT GCATATTGAT
GTGTCCAGAA ACTTCCATAG CAAGCAGTTG ATCTTAGATA TGTTAGATCA GATGGCGGCA
TATAAATTAA ATAAGCTACA CCTGCATATG GCAGACGATG AAGGTTGGCG ATTAGAGATC
GATGGGCTGC CGGAGCTAAC CGATATAGGC AGTAAACGTT GTCATGATCT GACCGAAACA
AGCTGCTTAC TGCCTCAACT CGGCAGTGGA CCATCTGCGG ACACCGCAGT CAACGGTTAC
TACTCAAAGT CAGATTATAT AGAGATCTTA AAGTATGCCT CAGCCAGGCA AATTCAGGTC
ATTCCATCGA TGGATATGCC GGGACATTCC CGGGCGGCCA TTAAGTCTAT GGAGGCACGC
TACAAGAAGT TAATGGCGCA GGGAAAGGAG CTGGCTGCGA AGGAGTATCT ATTGGTCGAT
TTCGATGATA AGACGGTTTA CTCATCGATT CAATATTATG ACGACAACAC CCTAAACGTG
TGTATGGAGT CGACGTTCCA TTTTGTTTCT AAGGTTATCG ATGAGATAGC TAAATTGCAC
CTGCAAGCGG GTCAGCCGCT CTCAATTTAT CATATCGGCG CCGATGAAAC GGCCGGTGCC
TGGCTCGAAT CTCCTGTCTG TGAAACATTC CTTGCAGACA ATGAGCAGGG CGTAAAATCC
AGTGACGAGT TTGGCGCATA TTTTGTCGAG CGAGTCTCAA ATATACTGAG TAAGAAAGGC
ATCGAACCTG CTGGCTGGAG TGATGGTATG AGTCATACTC GCCACGAAAA TATGCCTAAG
CAGTCACAGA GTAACGTTTG GGATGTGATC TCTCATGACG GTTATAAGCG TGCGCATCAG
CAGGTTAACC TAGGTTGGGA TGCCATTTTG GGTATGCCTG AAATGCTCTA TTTCGATTTC
CCATACGAAG CGGATCCGAA AGAGCATGGT TATTACTGGG CCAGCCGAAA TACTAACGAG
CGAAAGTTGT ATGGCTTTAT GCCGGATAAT CTTCCTGCAA ACGCCGAACA ATGGACAGAT
ATCCAGGGCC AGGCTTTTGA AGCGGATGAT ACTGAGCAAT TAGATGAAAA TGGTAAGCGT
GTCAGTGGAC CAATCAAAGA AGGCATGGGC TTTGGTGGTA TACAGGGACA GATCTGGAGT
GAGACCTTAA GAAGTGATGC CGTCGTCGAG TATATGACCT TTCCAAGGTT ATTAATCTTA
GCCGAGAAGG CATGGCATAA GGCCGATTGG GAAGTGCCAT ATCAATATGA GGGGGCGGTT
TATAATCAAG ACTCTGCTTT CTTTACTCAA GAGATGCGTG CCAGCCAATT GGAGCAATGG
TCAATAATCG CAAATACACT CGGCTATAAA GAGTTATCAA AGCTCGATAG GGCGGGTATC
GAATACCGTA TTCCTACCGT CGGCGCTCAT ATTCATGAGG GTAAGCTTTT CACTAATCTG
ATCTACCCTG GGCTCGATAT TGAATATCGA GTTACTGGTG GGCAGTGGCA AGCATATAAC
TCTCCTGTAG CGGTCGAGGG ACAAGTAGAG GTGAGGGCCG TTGGCGCTGA TGGGAAACGA
AGAGGCCGCT CCTTAGTCGT GATGTAA
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| Protein sequence | MKRKMMKFKL IAAAITLVLS TGACSQKVTS PTEAKILIDQ SITQSALNRL GDTLDIKYRL
ITNYPDGCPT SGVDGRCFSA QIDLTSSVDI ASKDWAIYFS QMRPVKSVNS DEFTITRVKG
DLHKIEPTAS FKGLKKGITK TIDFRGELWQ LSETDAMPNY YLVSGELKPV VIKSTQVTKD
AETGMELRPY NVAFTDADTQ YKRSDTDKLK WATPEVLFLD NQGVDTQPES AVNTIIPTPL
SVEVTSSDRP VSLAQGIKLN LNSIDAGAIT AALERLERIG VGQSENGLVV NFKKVTDGQA
SGSYRLNIAE NNITISAGDD AGFSYALASL TSLIDTNKLS VNTMSIQDHP RYGFRGMHID
VSRNFHSKQL ILDMLDQMAA YKLNKLHLHM ADDEGWRLEI DGLPELTDIG SKRCHDLTET
SCLLPQLGSG PSADTAVNGY YSKSDYIEIL KYASARQIQV IPSMDMPGHS RAAIKSMEAR
YKKLMAQGKE LAAKEYLLVD FDDKTVYSSI QYYDDNTLNV CMESTFHFVS KVIDEIAKLH
LQAGQPLSIY HIGADETAGA WLESPVCETF LADNEQGVKS SDEFGAYFVE RVSNILSKKG
IEPAGWSDGM SHTRHENMPK QSQSNVWDVI SHDGYKRAHQ QVNLGWDAIL GMPEMLYFDF
PYEADPKEHG YYWASRNTNE RKLYGFMPDN LPANAEQWTD IQGQAFEADD TEQLDENGKR
VSGPIKEGMG FGGIQGQIWS ETLRSDAVVE YMTFPRLLIL AEKAWHKADW EVPYQYEGAV
YNQDSAFFTQ EMRASQLEQW SIIANTLGYK ELSKLDRAGI EYRIPTVGAH IHEGKLFTNL
IYPGLDIEYR VTGGQWQAYN SPVAVEGQVE VRAVGADGKR RGRSLVVM
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