| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1207 |
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| Symbol | |
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| ID | 5613567 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1434292 |
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| End bp | 1435311 |
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| Gene Length | 1020 bp |
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| Protein Length | 339 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640932056 |
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| Product | alanine racemase |
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| Protein accession | YP_001472946 |
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| Protein GI | 157374346 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTCA CAATAAACGA TGTAGCAAAA TATGCAGGCG TCTCAATAAA GACGGTTTCC
CGAGTCACCA ATAATGAACC CTCTGTAAAG CAGGCTACCA TTGATAAAGT CAATGAAGCC
ATCGAGGCAC TAAATTACCA ACCCAATTTA GCAGCAAGAA ATTTGGCGGG TACAAAATCA
TATGTCATCG GCTTTATTTA CGACAACCCG AATGCTTATT ATGTCATTGA TATGCAAAAT
GGAATCCTAT CCTCATGCAA AGATCTGGGC TATGAGTTAT TGATTCATCC ATGTAACGCT
AAAGCAGATA ACATCTGTGA AGAGTTAACT AAGATGGTGA AGCATGCAAG GCTCGCAGGT
TTAGTGTTGA CGCCACCACT ATCTGAAGAC CCTAAGATTT TGGCAGCATT AGATAAGATA
GATGCAAATT ATGTACGTAT CATAGCTGGC GCTAACATCG ATGCAAAGAC TGGCTTGGCA
GTGCTGGTGA ACGATAAGCA TGGTGCCGTT TCTATTACTC AACATCTGAT TGAACTCGGT
CATAAAAATA TCGCTTTTCT GAGTGGCGAT CAGCACCATG AATCAACCAA AGAGCGACTA
GCCGGCTTTA CTGAAGCGAT GGAGAATAAT CACCTTGCCA TCAAGAAAGA CAATATTATT
GAAGGTGAAT ATTCATTTGA GTCCGGTGTA AAGGGCGCTA AAGAGCTGTT GAAAAGAGAT
GACAGACCTA CAGCCATCGT CGCCTGTAAC GATGAAATTG CAGCCGGAGC ATTATTTGCA
GCCAGGCTTG AAGGGATGGA TATACCTAAC GACATCTCTA TTGTTGGTTT CGAAGATAGC
CCTTTCTCGA GGCAGACATG GCCGAAGCTG ACAACGGTTC ATCAGCCAAA CCAGAAGATT
GCTCAGATGG CGACCGAACT ACTGATCGCC AATAGACGTG CACAAACTTC TGAAGATGCA
AAAATATTTA TACCGGAACC AGTGATAAGA GACTCCTCGT CCCATCCGGC TGTAAAATAA
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| Protein sequence | MKVTINDVAK YAGVSIKTVS RVTNNEPSVK QATIDKVNEA IEALNYQPNL AARNLAGTKS
YVIGFIYDNP NAYYVIDMQN GILSSCKDLG YELLIHPCNA KADNICEELT KMVKHARLAG
LVLTPPLSED PKILAALDKI DANYVRIIAG ANIDAKTGLA VLVNDKHGAV SITQHLIELG
HKNIAFLSGD QHHESTKERL AGFTEAMENN HLAIKKDNII EGEYSFESGV KGAKELLKRD
DRPTAIVACN DEIAAGALFA ARLEGMDIPN DISIVGFEDS PFSRQTWPKL TTVHQPNQKI
AQMATELLIA NRRAQTSEDA KIFIPEPVIR DSSSHPAVK
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