Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ssed_1196 |
Symbol | |
ID | 5613195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sediminis HAW-EB3 |
Kingdom | Bacteria |
Replicon accession | NC_009831 |
Strand | + |
Start bp | 1424387 |
End bp | 1424809 |
Gene Length | 423 bp |
Protein Length | 140 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640932045 |
Product | peptidylprolyl isomerase, FKBP-type |
Protein accession | YP_001472935 |
Protein GI | 157374335 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00153293 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGTCTGATC TACGTTCTAT TTTATGTCAT ATGAATATTG TGCTTGAAGA TGGCTCTACA GCCGACAGCA CTAAGGCTTC CGGTAAGCCT GCTAGATTAA ATATCGGTGA CGATACCCTG AGTCCGGCTT TTGAGTCTCA GATCGCAAAC TTGGTCGAAG GGGATAAGCA CTCTTTTACC CTCGGCGCTG GTGATGCCTT TGGTGAGTCT AATCCTGATG CGATTCATCA TATGGGCAGA AGTAAATTTC CGGCTGATAT GTCACTCGAG CCTGGTGTTA TCGTCAGTTT TGGCGGACCT GGTGGAAGTG AGATCCCCGG TATCGTTCGT GAACTGGCTG GAGATTCGGT TACGGTCGAT CTGAACCATC CTTTAGCGGG TCGGACAGTC ACATTCGAAC TTGAAGTCGT ACAGGTACTT TAG
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Protein sequence | MSDLRSILCH MNIVLEDGST ADSTKASGKP ARLNIGDDTL SPAFESQIAN LVEGDKHSFT LGAGDAFGES NPDAIHHMGR SKFPADMSLE PGVIVSFGGP GGSEIPGIVR ELAGDSVTVD LNHPLAGRTV TFELEVVQVL
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