| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1182 |
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| Symbol | |
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| ID | 5612318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | + |
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| Start bp | 1406065 |
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| End bp | 1406610 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640932031 |
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| Product | hemerythrin HHE cation binding domain-containing protein |
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| Protein accession | YP_001472921 |
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| Protein GI | 157374321 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3945] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0279735 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGCCA GACTGAACAG TGATCATAAG CACATTACCA TTTTGCTAAA CGTTCTAAAG
GTTAAATATA GGAAGCTAGC CGAAGGCGAG GCTGTTAACT TTAACCTCAT CAGGGATGTC
GTCGAGTATA TGCAAAGCTA TGCGGAGCAT AGTCATCACC CTTTAGAAGA TATTATTTAC
AACTACTATC TGGAAAAAGT TTCACAAGAG GATAGCCCTA ATAAATTGGC CGAAGAACAT
CATCAATTGA TCGATGCTTC GGCCTCTCTG ATGTCGACAC TGAACCTGAT TTTAAGTGAT
GTGGTCGTGT CCAGAGAGCA ATTAGTGGTC GACCTCAAAG AGTATGTCGC ATTGCAAGAG
CGGCATATGC AGTATGAAGA TAATACCATT TTCCCACTTT TGGCTCAGGA GATGGATGAG
CAAGATTGGG GAAAGGTTCA GGAGCTGTGT TCATTAAAGC TTATCGACGA TCCTCTATTC
AGCGATAACG ATAATGTCTT GTTTGAAGAG CTTAGAGATT ATATTAAGGA TGATGAGATC
TTCTAA
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| Protein sequence | MLARLNSDHK HITILLNVLK VKYRKLAEGE AVNFNLIRDV VEYMQSYAEH SHHPLEDIIY
NYYLEKVSQE DSPNKLAEEH HQLIDASASL MSTLNLILSD VVVSREQLVV DLKEYVALQE
RHMQYEDNTI FPLLAQEMDE QDWGKVQELC SLKLIDDPLF SDNDNVLFEE LRDYIKDDEI
F
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