| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ssed_1174 |
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| Symbol | |
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| ID | 5611502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sediminis HAW-EB3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009831 |
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| Strand | - |
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| Start bp | 1394678 |
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| End bp | 1395307 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640932023 |
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| Product | peptidylprolyl isomerase, FKBP-type |
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| Protein accession | YP_001472913 |
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| Protein GI | 157374313 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1047] FKBP-type peptidyl-prolyl cis-trans isomerases 2 |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAATCA CTCAACACAG TGCTGTAAGC ATTCATTACC GTTTATCAAA CGCAAAAGGC
GAATTGATCG AAGACTCTTT TGAAGGCGAG CCAATGCTCT ACCTGCATGG GGCAGAAAAT
ATGATCCCTG GCCTTGAGTC TCAACTTGAA GGCAAGGTTG CCGGTGATAA ACTTGAGGTG
TCTGTTAGTG CTGAAAATGG CTACGGTCCA TATCATGATG GTTTAAAGCA AGAAGTACCA
TTGAGTGCAT TCGGCGATAT TCAGGACATC GTTCCTGGTA TGCGCTTTAT CGCAGAAACT
GAAATGGGCC AACGCCCGGT TCAAGTTAAA GAAGTGAAAG ATGATATTGT CGTTGTCGAT
GGTAACCATC CATTAGCCGG TCAATCTCTG ACCTTTGACG TCGAAGTTCT TGATGTTCGT
GAAGCTACAG CTGAAGAGAT CGCTCACGGT CATATCCATG CACATGGCGG TTGCGGATCA
GAAGGTGGTC ACGAGCACAG CCATGAAGGC GGTTGTTGTG GCGGTTCAGA CCATGAACAT
AGCCATGAAG GTGGCTGCTG CAGCGACAAG CATGACGAGC CAGCTAAAGA AGGCTGTGAC
GGTAATGGCG GTTGCGGCTG CAGACACTAA
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| Protein sequence | MKITQHSAVS IHYRLSNAKG ELIEDSFEGE PMLYLHGAEN MIPGLESQLE GKVAGDKLEV
SVSAENGYGP YHDGLKQEVP LSAFGDIQDI VPGMRFIAET EMGQRPVQVK EVKDDIVVVD
GNHPLAGQSL TFDVEVLDVR EATAEEIAHG HIHAHGGCGS EGGHEHSHEG GCCGGSDHEH
SHEGGCCSDK HDEPAKEGCD GNGGCGCRH
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